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scnpilot_p_inoc_scaffold_12671_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1100..1489

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 128.0
  • Bit_score: 207
  • Evalue 9.50e-51
Ribonuclease VapC n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AZA1_PARDP similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 128.0
  • Bit_score: 207
  • Evalue 6.80e-51
twitching motility protein PilT similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 128.0
  • Bit_score: 207
  • Evalue 1.90e-51

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Taxonomy

Paracoccus denitrificans → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGCTGGACACGAACATCATCTCTGATCTCGTGAAAAATCCGCAGGGGCGCGCGGCGCAGAGAATTGCCGAAGTGGGCGCGGATGCCATCTGTGTCAGCATCATCACCGCTGCCGAGCTGCGCTACGGCTGCGCGAAAAAAGGATCGGAAAAACTGCTGGCCCATGTCGAGGCGATCCTGGGAAGCGTGCAGGTCCTTGCGCTCGATCTGCCTGCCGATGCGGAATACGGCAGCATCCGTGCCAGTCTGGAAGCGGCGGGCAAGCCTATCGGGCCAAACGATCTGCTGATCGCAGCACATGCCTGCTCCGCCGGCGCGGTGCTGATCACAGCAAACACTAGCGAGTTCATCCGCGTTCAAGGACTGCACGTCGAGAACTGGCTGGCCTGA
PROTEIN sequence
Length: 130
MLDTNIISDLVKNPQGRAAQRIAEVGADAICVSIITAAELRYGCAKKGSEKLLAHVEAILGSVQVLALDLPADAEYGSIRASLEAAGKPIGPNDLLIAAHACSAGAVLITANTSEFIRVQGLHVENWLA*