ggKbase home page

scnpilot_p_inoc_scaffold_12755_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1634..2050)

Top 3 Functional Annotations

Value Algorithm Source
molecular chaperone DnaK n=1 Tax=Methylopila sp. M107 RepID=UPI00035CAA2C similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 138.0
  • Bit_score: 246
  • Evalue 1.40e-62
TraR/DksA family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 138.0
  • Bit_score: 246
  • Evalue 5.20e-63
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 138.0
  • Bit_score: 246
  • Evalue 2.60e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGACGGCAGACAGCCTTGAAGAGTATCGGCCCTCCGAGGCCGAGCCCTTCATGAACGAACGGCAGAGGGAGTATTTCCGCAGGAAGCTCCTTGCCTGGAAAGAGGACATCCTCAAGGAGTCGCGCGAGACTCTCCAGCATCTGCAGGACGAGAACCAGAACCACCCGGACCTCGCCGATCGCGCATCGTCGGAAACCGACCGGGCCATCGAACTGAGGGCGCGCGACAGGCAGCGCAAGCTCATCTCCAAGATCGACGCCGCGCTGCAGCGGATCGAGGACGGCAGCTACGGTTTCTGCGAGGAGACTGGCGAGCCGATCAGCCTCAAGCGTCTCGACGCCCGCCCCATCGCCACACTGTCGATCGAAGCGCAGGAGCGTCACGAGCGGCGCGAGCGCGTCTATCGCGACGACTAG
PROTEIN sequence
Length: 139
MTADSLEEYRPSEAEPFMNERQREYFRRKLLAWKEDILKESRETLQHLQDENQNHPDLADRASSETDRAIELRARDRQRKLISKIDAALQRIEDGSYGFCEETGEPISLKRLDARPIATLSIEAQERHERRERVYRDD*