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scnpilot_p_inoc_scaffold_12756_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(776..1693)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PEU2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 297.0
  • Bit_score: 141
  • Evalue 1.40e-30
LysR-family transcriptional regulator {ECO:0000313|EMBL:EWM14678.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.9
  • Coverage: 289.0
  • Bit_score: 143
  • Evalue 5.20e-31
LysR family transcription regulator similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 308.0
  • Bit_score: 134
  • Evalue 3.70e-29

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Taxonomy

Kutzneria sp. 744 → Kutzneria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGCGTGATCTGGCAGCGCTCCGAAGCTTTGTCGCCGTGGTGGACAACGGGTCGATCGTTGATGCGGCGCGCGTCTGCGGATACAGCGCTCCGGCAGTGTCTCGCCACATTGGCGCTCTCGAACGCGAACTCGGTGTGACGCTTTTCGAGCGCACAGGACGGTCAGTCCGCCCGTCGGTAGCCGCTCGTGCACTGGCGGAGCGCGCTCGCCTGCTTCTGGAAGAGGCGGAGCAGTTCGATCGCGAAGCCCGTGCGCTGGCGACCGGGGACATCGGTGTCATCAGATTGGCTTACTTCCGCGCTGCGGGCGCGACCATCGTTCCCCGGGCGCTCGCTGTGCTCGAGGCGTTGCGCCCCGGGGCGAAAGTGCTCCTTATCGAATGTGAGCTGAGTGAGGATGTCGAGGCGCTGCTGCGCTCGCGCGACGCCGACCTGGGCTTCGTCTGGGGTTTTCCGGAACCTCAGCCCACCGATCTGGTCACGTCACTCCTCTTTCGGGAAAGCCTGGTGCTGATGACGTCAGTCGACCGGGATGACCTCCACGAGCAACCGCATGACCTGTCCCGGCTGACCGGCGAGGTGTTCGCCTCGGCACCCGGCCATCGGGGTGCGCCGCCGATCGTAGATCGACTGTTCGAGTCGCGCGGTCTGCCGCGCCCGACCGTGACTCATCGTCCGACTGACCACGCGATGCTGCGCAGTCTGGTCATGGCCGGCGTCGTGATCAATCTCATCCCCGCGCTGGGCGTCTCGGATATCGCACCGGGCGTGCGCCGATCAGTCGCGGTTCCCGACTTCCGCCGTACATACCTGTCCTGGGCGGATGCTTCCGTGAACCCGCTCGTCGCGGCGATGGTGCGAGCAGTCCGTATCGCGGGGGCTGAGTTCTCGGGATTCGGGGTCGACTACGTCGGCTGA
PROTEIN sequence
Length: 306
MRDLAALRSFVAVVDNGSIVDAARVCGYSAPAVSRHIGALERELGVTLFERTGRSVRPSVAARALAERARLLLEEAEQFDREARALATGDIGVIRLAYFRAAGATIVPRALAVLEALRPGAKVLLIECELSEDVEALLRSRDADLGFVWGFPEPQPTDLVTSLLFRESLVLMTSVDRDDLHEQPHDLSRLTGEVFASAPGHRGAPPIVDRLFESRGLPRPTVTHRPTDHAMLRSLVMAGVVINLIPALGVSDIAPGVRRSVAVPDFRRTYLSWADASVNPLVAAMVRAVRIAGAEFSGFGVDYVG*