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scnpilot_p_inoc_scaffold_13705_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1252..1599)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=2 Tax=Brassica campestris RepID=M4CPB9_BRARP similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 116.0
  • Bit_score: 116
  • Evalue 1.80e-23
BnaC03g04240D protein {ECO:0000313|EMBL:CDX81170.1}; TaxID=3708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 116.0
  • Bit_score: 116
  • Evalue 2.00e-23
hrpB; ATP-dependent helicase hrpb similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 114.0
  • Bit_score: 111
  • Evalue 2.20e-22

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Taxonomy

Brassica napus → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 348
ATGGTGATTCCATTACATGGTAAACTGAGTCCTGAAGAACAAAAAAAAGCTTTCGCCAAAACCAAAGAACACAAACTTATTTTTGCATCGAGAATCGCAGAAACAGCCATCACAATCGATGGAATAAAAGTTGTCATCGATCCTGGATGGGACAGAGAAATGCAGTACAACCAACAAACTAAGTTCTCATCAATGAAACTAACACAGATCAGTCAATCATCAGCCAAACAAAGAGCAGGAAGAGCAGGTAGAACACAAGAAGGATACTGTCTCAGACTGTACTCTGAATACGAGTTGAAAAGTAGAAGATTCAACAAACTGCCAGAAATCAAGAATATCGCTTTGTAA
PROTEIN sequence
Length: 116
MVIPLHGKLSPEEQKKAFAKTKEHKLIFASRIAETAITIDGIKVVIDPGWDREMQYNQQTKFSSMKLTQISQSSAKQRAGRAGRTQEGYCLRLYSEYELKSRRFNKLPEIKNIAL*