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scnpilot_p_inoc_scaffold_13712_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2058..2273

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspA n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z994_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 69.0
  • Bit_score: 106
  • Evalue 1.50e-20
Cold-shock protein {ECO:0000313|EMBL:KKB08592.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 71.0
  • Bit_score: 136
  • Evalue 1.50e-29
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 64.0
  • Bit_score: 101
  • Evalue 1.10e-19

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGCCACTCACAAGGGCACCGTAAAGTTCTTCAACACCACCAAGGGTTTCGGTTTCGTCACCCCTGACAATGGCGGCAAGGACCACTTCGTCCACATCTCTGCCGTTCAGCGTTCGGGCATCGACGGTCTCTACGAGAACGACAAGATCTCGTACGAAGTCGAAACCGGCCGTGACGGTCGCGAGTCCGCTGTCAATCTGGTTCTCGAGAAGTAA
PROTEIN sequence
Length: 72
MATHKGTVKFFNTTKGFGFVTPDNGGKDHFVHISAVQRSGIDGLYENDKISYEVETGRDGRESAVNLVLEK*