ggKbase home page

scnpilot_p_inoc_scaffold_12464_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 523..921

Top 3 Functional Annotations

Value Algorithm Source
Anti-ECFsigma factor, ChrR n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q143V8_BURXL similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 132.0
  • Bit_score: 215
  • Evalue 4.40e-53
anti-Sigm factor, ChrR similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 132.0
  • Bit_score: 215
  • Evalue 1.20e-53
Anti-ECFsigma factor, ChrR {ECO:0000313|EMBL:ABE29381.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xe similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 132.0
  • Bit_score: 215
  • Evalue 6.10e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia xenovorans → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGGCCACTACCCCCGGCCTCGCCGGCGAGCAAGCGCTCGCCCCCCTGGACTCGCGCTACGTCGACGTCAGCGCGCTGCCCTGGAAGCCCACGCCCACGCCGGGCATCGACATGAAAGTGCTGATGGAGGACACGCAAAGCGGTCTGCTCACCGCCCTGTTCCGCTGGCAACCCGGCACTGCGCTGCCGCTGCACGAGCACGTGGAGATCGAGCAGACCTATGTGCTGTCTGGCAGCATCGTCGACGACGAAGGCGAGGTGCGCGAGGGCGACTACGTCTGGCGCCCCAAGGGCAATCGGCACGTCGCACGCTCCCCGGGCGGCGCGCTCGTGCTGTCCTTTTTCCTCAAGCCCAACAAGTTCTTGCTGGGCGAGCTGGCGGGCAAGGAACTGAAGTGA
PROTEIN sequence
Length: 133
MATTPGLAGEQALAPLDSRYVDVSALPWKPTPTPGIDMKVLMEDTQSGLLTALFRWQPGTALPLHEHVEIEQTYVLSGSIVDDEGEVREGDYVWRPKGNRHVARSPGGALVLSFFLKPNKFLLGELAGKELK*