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scnpilot_p_inoc_scaffold_12521_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2653..3036)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Pseudomonas sp. HYS RepID=UPI00029B48BF similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 72.0
  • Bit_score: 81
  • Evalue 9.50e-13
Short-chain dehydrogenase {ECO:0000313|EMBL:KJK19395.1}; TaxID=1619950 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 72.0
  • Bit_score: 81
  • Evalue 1.00e-12
short-chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 66.0
  • Bit_score: 74
  • Evalue 2.50e-11

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Taxonomy

Pseudomonas sp. 2(2015) → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGCAGGCAAAGGGTCTTGCAGGTCGGCGGGCCGTGATCACCGGCGCCGGGCGCGGGCTGGGCGCGGCACTTGCCATTGCGCTGGCCGAGGCCGGAAGCAGCGTCGTGCTCTGCGGCCGCAATCCGGCCGGGTTGTCGGATACCGCAGCGATCATTCGCGAACGAACGAGTAGCGAGCCACACCGCGTCGCGCTCGATCTCGCCGATGCCGCCAACGTCGAAGCTGCCGGCCGAAAGCTTGCCGACAGCGAGGGCAGCCGCGGCAGCAATCGCGATGTCGTCGAAGCCGTCATCTTCGCCTTGACGCGGCCGCGCCACCTGACCTTGGCGATCACGCTCGATGCTGATGACGGCGGGCAGTTCCCGAAAATGCCTTGTGGCTGA
PROTEIN sequence
Length: 128
MQAKGLAGRRAVITGAGRGLGAALAIALAEAGSSVVLCGRNPAGLSDTAAIIRERTSSEPHRVALDLADAANVEAAGRKLADSEGSRGSNRDVVEAVIFALTRPRHLTLAITLDADDGGQFPKMPCG*