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scnpilot_p_inoc_scaffold_14135_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..3142

Top 3 Functional Annotations

Value Algorithm Source
FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA similarity UNIREF
DB: UNIREF100
  • Identity: 31.5
  • Coverage: 999.99
  • Bit_score: 485
  • Evalue 1.00e-133
  • rbh
FACT complex subunit {ECO:0000313|EMBL:EDQ51477.1}; TaxID=3218 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Phy similarity UNIPROT
DB: UniProtKB
  • Identity: 31.5
  • Coverage: 999.99
  • Bit_score: 490
  • Evalue 5.90e-135
GTC1501; FACT complex subunit similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 999.99
  • Bit_score: 485
  • Evalue 3.30e-134
  • rbh

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Taxonomy

Physcomitrella patens → Physcomitrella → Funariales → Funariidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 3141
GGCGGCAAGCCCTGGGGCGCGGGCGACGACGGCACGGGCGCCGCGACGTCCCTCGCACTCGTCACAGGCACGGCGCCCGAGGGCATTGTGTACACGCGTTCGGGCTCGCTCCAGGTCCACCTGTTCGGCTACCTGGTCTCGGACATCATCCTGCTCTTCACTCTGTCCGACCGCACGCTCCACGTCTTCTGCACTGCGAAGCGCATGGCTTTCTTCTCCTCAGCCGGCACCGCGGACCCCAGCAACACGATGAAGCTGAAGCTGCACGAGAAGGCCAAGGGGGCGCCCGAGGCCGACGCCGAGGCCACTCTGGCGCTGATCAAGGCCGCCGGGCTCACCCGCGTCGGCGTGCTCTCCAAGGACAAGCCCGAGGGCCAGTACGCCGGTCGTGCCCGCAAGACGCTCTTCGAAGACTCGCGGCTGCCGCAGGTCGACGTCATGGCCGGCACAGCTCTCGCGCTGCAGATCAAGGACGCGGCCGCGCTCGAGTCGATGCGCCACGCCTCGGCGCTGTCTGCGCTGGCTCTGCACAAGGTCGGATACCCGCGTGTCGCGCGCGCCGCCGCCGAGGGCAAGGCACTGACGCACGCCAAGTGGGCGCAGATCGTCGAGCAGGCGCTGTCCAACGCCGCCGAGGCCGTGCCGGGTGCCGCGGACCGCGGGATCGCCGCCGAGGACGTCGAGCTCGCGCTGACTCCTCTGCTGCAGTCGGGCGCCGCGTTCGACGCCAAGCCTTTCGTCGAGCCCAGCGACGCCAAGGCGACCTGGGACACGCTCTCACTCTCCGTCGGTGCGCGGTACCGCTCCTACTGCGGCTTTGCGTCCCGCTCGGTGTTTGTCCGTCCTACCGAGGAGCACGAGTCCGCGTGGGACCTGCTCCTCGCCGCTTCCCGCGCCGGCGCCGCTGCGATGGTTGCCGGCGGCAAGGCCAAGGACGTGCACGACGCCGTCGAGGCCACGGTTCGCGCGGCGCGGCCGGAGTGGGTCGAGAAGCTCACCAAGACGTGCGGCGCTGGCATTGGACTCGAGTTCCGCGAGGCCCAGCTCCCGCTGTCCGCGGCCAGCACCGTCACGCTCGCAGAGGGCATGGCGCTCAACCTCTCCATCGCGCTGTCGGGGCTCAAGCCCGGCAAGACGAACAACGACGACGGCAAGCGTAAGGATTTCTCCGTGTTCCTGGCCGACACCTACGTCGTCCGCCCCCGCGGCACCGGCGCCGCTCCCGCGGGCCCCGAATGTCTGACCGACGCCGCACCGCGCGACTTCACCGCTCTCACGGTCACTATGCCCGAGGCCGGCAAGGACGACGACGAGTCGGGCTCCGACGCCGGCTCCGGCGCCGAGGACGAGGCCGAGGGCGAAGGCGCTGGAACGGCCCGCTCCGACGATCGCCGCTCGCGCGCGGCACGTGCCCAAGACGAGGCCAAGGAGCGCCAGCGCGAGGAGGAGGACCGCAAGACCCGGCAGCGCGAGCTCGCCAAGCAGCGCGCGTCCGAGGCGCTGTTGCGGTATGCCGACCACGACGGCAACGAGTCTGCCGCCGAGGCCCGCGCCACCGCGGCCGCCCGCGTGCGCGCGTACGCCGATGCGACCAAGATTCCCACTGCGGCGCGCCCGAACCGGCTGACGGTGGACCGGCCGAACAAGGCCGTTCTGGTGCCGATCAACGGGCAGCTCGTCCCGTTCCACGTCTCGCTGATCAAGGCCGTGCGCCACTCGCAGGTCGGTGCGCACTACGTGCTGCGGATCACCTTCCAGACCCCCGACGCCAAGGGCTCGATCGAGTCGCTGCCGCCCGGGTCCCGACCCGAGCACGCGTTCCTCAAGGAGGTTTCGTTCCGCACTAAGTCGCCCTCCGCGCTTGCTGAGGTTCATACAGTGCTTGAAACGATGCGGAAGGAAGCCGTCGCCGCCAAGAAGGACGCCGAGGCCTCCGCGTCGGGCGCGGGCGCGATCGTTGAGCAGCCCCCTCTGCGCGTGCTGGCGCAGGCCTCAGTGCGCCTCCGCGACGTCGCGTGCCACCCAGCGATCGGCTCCGGCACGGGCACGCGCAAGAGCGCAGGCATGCTGACAGCGCACCAGAACGGCTTCCGGTACATGACCAAGGACCGCGATGGGACGGCGCACGTCGACATCATCTACGAGAACATCAAGGGCTGCTTCGTGCAGCGCGCAACTGCCCGCGATGAGGAAGTCGTGCTGCACATCGAGCTCAAGAACGCCATCAAGATCGGCGCCAGCAACAACAAGCGGTCTGCGTTCTTGCAGTTCTTCTACAAGGTCGTCGACTCGGCGCAGGACGTGAGCACGGCCAGCTCGCGCTACGACGACGAGGAGGAGATGCGTGCCGAGCGCGAGGAGGAGCAGCGCCGCAAGGACTGGAACCAGCGGTTCATGGACTTCGCGACCGCATGCGACCGGATGTGGGAGGCCGATGTGCGCATTGACCTTCGGTTTGAGTCTCCGTTCCGCAAGCTCATGTTCACGGGTGTCGTCAGCAAGGAGAACGTCGATCTCTTCCCCACGACCAACTTCCTCATCGCGCTTAAGAACCGACCGAAGCCGCTGGTTCTGAGCCTGACCGAGATCGAGCTGGCGTCGCTGGAGCGCGTCAACTTCAACCAGCGTGAGTTCGATATCGTGCTCGTCTTTAAGGACTACGCGCGCACGCCCGAGATGCTCACCTCGGTGCCGCTCAAGTATCTCGAGGCCATCAAGATCTGGCTATCGAGCGTCGGCGTGCTTTACCACGAGTTCCCCGCCAACATCCGCTGGGCTGAGGTTTTGCCCGAAATTCTCAAGGACGTCCGCGGGTTCTTCGACGACGGCGGCTGGAGCGCGCTCGTCGACGACGACGATGAGGATGCAGGGTCCGGTGGCTCTGGATCTGACTCGGAGTCCGCGGCCTCGGCGTCCGAGTACGAGATAAGCGGCAGCGAGAGCTCCGAGAGCGACGACTTCACCTCGGACGACGAGTCGGGCTCAGAGTCCGGCTCCGACTCCGAGGAGGCAGACGAGGACGATGAGGACGCGCTTGACTGGGATGAACTCGAGGCCAAGACGCGTAAGGAAGAGAAGGCTAAGCTTTTCGGCAAGGGCAAGGACAAGAAGGGCTCCGACTCGGACTCCGACTCCGACTAA
PROTEIN sequence
Length: 1047
GGKPWGAGDDGTGAATSLALVTGTAPEGIVYTRSGSLQVHLFGYLVSDIILLFTLSDRTLHVFCTAKRMAFFSSAGTADPSNTMKLKLHEKAKGAPEADAEATLALIKAAGLTRVGVLSKDKPEGQYAGRARKTLFEDSRLPQVDVMAGTALALQIKDAAALESMRHASALSALALHKVGYPRVARAAAEGKALTHAKWAQIVEQALSNAAEAVPGAADRGIAAEDVELALTPLLQSGAAFDAKPFVEPSDAKATWDTLSLSVGARYRSYCGFASRSVFVRPTEEHESAWDLLLAASRAGAAAMVAGGKAKDVHDAVEATVRAARPEWVEKLTKTCGAGIGLEFREAQLPLSAASTVTLAEGMALNLSIALSGLKPGKTNNDDGKRKDFSVFLADTYVVRPRGTGAAPAGPECLTDAAPRDFTALTVTMPEAGKDDDESGSDAGSGAEDEAEGEGAGTARSDDRRSRAARAQDEAKERQREEEDRKTRQRELAKQRASEALLRYADHDGNESAAEARATAAARVRAYADATKIPTAARPNRLTVDRPNKAVLVPINGQLVPFHVSLIKAVRHSQVGAHYVLRITFQTPDAKGSIESLPPGSRPEHAFLKEVSFRTKSPSALAEVHTVLETMRKEAVAAKKDAEASASGAGAIVEQPPLRVLAQASVRLRDVACHPAIGSGTGTRKSAGMLTAHQNGFRYMTKDRDGTAHVDIIYENIKGCFVQRATARDEEVVLHIELKNAIKIGASNNKRSAFLQFFYKVVDSAQDVSTASSRYDDEEEMRAEREEEQRRKDWNQRFMDFATACDRMWEADVRIDLRFESPFRKLMFTGVVSKENVDLFPTTNFLIALKNRPKPLVLSLTEIELASLERVNFNQREFDIVLVFKDYARTPEMLTSVPLKYLEAIKIWLSSVGVLYHEFPANIRWAEVLPEILKDVRGFFDDGGWSALVDDDDEDAGSGGSGSDSESAASASEYEISGSESSESDDFTSDDESGSESGSDSEEADEDDEDALDWDELEAKTRKEEKAKLFGKGKDKKGSDSDSDSD*