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scnpilot_p_inoc_scaffold_14416_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(47..1207)

Top 3 Functional Annotations

Value Algorithm Source
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=4538 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 367.0
  • Bit_score: 415
  • Evalue 1.20e-112
pdhA; pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1) similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 353.0
  • Bit_score: 356
  • Evalue 1.30e-95
Uncharacterized protein n=1 Tax=Oryza glaberrima RepID=I1P439_ORYGL similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 367.0
  • Bit_score: 415
  • Evalue 8.40e-113
  • rbh

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Taxonomy

Oryza glaberrima → Oryza → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1161
ATGCTCAGTAAGACTCTTCGCCTTTCGAAGGCGCTTTCGAAGGCGCCCATCGGTGCTCGCATGATGTCGTCCAACACGGCGACGTTCAAGGTCGGTCGCGACTTCAAGGGCCACAAGCTCGACAACCTTCCCGCCAACACCGTGACCACTACTAAGGACGAGATGCTCAAGTTCTACCGTGAGATGGTTCTCTACCGCCGTCTCGAGATCGTCTCGGACACGCTGTACAAGGAGCGCCTCATCCGCGGCTTCTGCCACCTCTACGACGGCCAGGAGGCCATCGTCACCGGTATGGAGGCTGGTCTCCGCCGCACCGACTCCGTCATCACGGCCTACCGCGACCACTGCCACCAGATCTCCCGCGGCGACTCGCTCGAGTCGATGTTCGCCGAGCTCCTGGGCCGCGCCTCGGGCTGCTCGCGCGGCAAGGGCGGCTCCATGCACATGTACCACAAGGAGGGCGGCTTCTACGGCGGCAACGGCATCGTCGGCGCTCAGGTCCCCCTCGGCGCCGGTCTCGCCTTCGCCCACAAGTTCCGCGGTGACGGCGGCGTCGCCGTGGCGGCCTACGGCGACGGCGCGGCCAACCAGGGCCAGGTCTTCGAGGCGGCCAACATGGCCGCGATGTGGAAGCTGCCCCTCATCTTCCTCTGCGAGAACAACAACTACGCCATGGGCACCTCGACGGCGCGCCACGCCGCGTCGGCCGACTTCTACACCCGCGGCGACTACGTGCCCGGCATCTGGATTGACGGCATGGACGTCCTCGCCTGCAAGGCCGGCTTCCAGTTCGCCATCGACCACTGCCGCTCCGGAAAGGGCCCGATCTTCGTCGAGGCCTCGACCTACCGCTACCACGGTCACTCGATGTCCGACCCCGGCCTCTCGTACCGCTCCCGCGACGAGGTGGCGTCGATGCGCGCCCAGCGCGATTGCATTGACAACTGCAAGAACCGCATCCTCGAGGCCGGCTTCGCGACCGCGGCGGACCTCAAGGCCATCGACAAGGAGGTCAAGGGCCAGGTCGACGTCGCCGTCGAGAAGGCCAAGGCGTCCCCGCAGCCCGTCGTCGGCGAGCTGTTCGAGCACATCTACCACGGTGAGCCCCCCAAGACGGTGCGCCACACCGAGCTCATCAACTCCGTCTCCCCCGCCCACTAA
PROTEIN sequence
Length: 387
MLSKTLRLSKALSKAPIGARMMSSNTATFKVGRDFKGHKLDNLPANTVTTTKDEMLKFYREMVLYRRLEIVSDTLYKERLIRGFCHLYDGQEAIVTGMEAGLRRTDSVITAYRDHCHQISRGDSLESMFAELLGRASGCSRGKGGSMHMYHKEGGFYGGNGIVGAQVPLGAGLAFAHKFRGDGGVAVAAYGDGAANQGQVFEAANMAAMWKLPLIFLCENNNYAMGTSTARHAASADFYTRGDYVPGIWIDGMDVLACKAGFQFAIDHCRSGKGPIFVEASTYRYHGHSMSDPGLSYRSRDEVASMRAQRDCIDNCKNRILEAGFATAADLKAIDKEVKGQVDVAVEKAKASPQPVVGELFEHIYHGEPPKTVRHTELINSVSPAH*