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scnpilot_p_inoc_scaffold_14495_7

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3121..3585

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein, TolC family n=1 Tax=Variovorax sp. CF313 RepID=J2KG74_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 155.0
  • Bit_score: 279
  • Evalue 2.20e-72
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:EJL79190.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 155.0
  • Bit_score: 279
  • Evalue 3.10e-72
type I secretion system outer membrane protein, TolC family similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 155.0
  • Bit_score: 270
  • Evalue 2.20e-70

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGCCTTCCAGGCCCCGGCTTTCGCCACTTTCCGCAGCGCTCGCAAGCACTTTCGCAGCACTGCTCGCATTGCCGGCCCAGGGCCAGACACTGAACGAACTGTATGACGCCGCCCGCAGCTACGACGCCACCTACCAGGGCGCGCGGGCCCAGTACGACGCCAACGTGGCGCGCGCCGCGCAGGCCAAGGCCGGCATCCTGCCGGCGGTCGGCCTCACGGCCGGCGTGACGCGCAGCGACATCGAGATCGACACCCTCACGGGCACCGGCCGCGGCACCACCACCCCGCGCGACTTCAACACGCAGAACGTCGGCATCAACGCCACGCAGCCGCTGTACCGGCCCGCCAACTGGGCCACCTACGAACAGGGCAAGCGCCAGGCCGACATCGCGCGAGCGGTGTTCACCATCGCGGAGCAGGACCTGATCGTGCGCGTGAGCCAGGCCTACTTCGACGTGCTCGCC
PROTEIN sequence
Length: 155
MPSRPRLSPLSAALASTFAALLALPAQGQTLNELYDAARSYDATYQGARAQYDANVARAAQAKAGILPAVGLTAGVTRSDIEIDTLTGTGRGTTTPRDFNTQNVGINATQPLYRPANWATYEQGKRQADIARAVFTIAEQDLIVRVSQAYFDVLA