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scnpilot_p_inoc_scaffold_14586_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2152..2889

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBE8_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 249.0
  • Bit_score: 239
  • Evalue 4.00e-60
Uncharacterized protein {ECO:0000313|EMBL:ETZ24833.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4 similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 248.0
  • Bit_score: 242
  • Evalue 8.60e-61
FecR protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 246.0
  • Bit_score: 230
  • Evalue 4.00e-58

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Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 738
ATGCTCAGCCGGCAGGGGAATATTAAAGTCCTGAAATTAGATAATGGCTCATTAAGCTATACCGGGCAGGGAATGAAAAAGAGTGCAAATAATGAAACGGTCTTCAATACCATAAGCACACCCCGTGGCGGACAATACCAGGTTACATTATCAGACGGCACAAAAGTTTGGCTGAATGCGGCTTCTTCTATCAGCTTTCCTGTGGCTTTCACAGCTACAGGGCGCAGCGTATCCGTTACCGGCGAAGCATATTTTGAAGTTGCCCACGACAGGCACAGACCCTTCAAAGTACAGATCAATAACAGTGAGATTGAAGTGCTGGGCACACACTTTAATGTAAACGCATACGAAGATGAAGCAACGGTCAGAACCACTTTGCTGGAAGGAAAGATAAAACAAACCACAAAGGATGGGACCCTTCAAAAAATCTTATTGCAGGGGCAGCAATCCGACATCCGTAAAAATGGAGAGATAAGTGTGAGCTCAAATGTTGATACCGAAGAGGCGGTTGCATGGATGCAGGGCAACTTTCAATTCAGGAGCGCCGATCTGCGCGCGGTATTGCGGCAGGTATCGCGATGGTATGATGTGGATATAGAATATAAGGGGAATGTAGACCTGCATTTTACCGGTCAATTGCCACGGAGTGAAAATGCGTCCACCCTGTTTGAAAACCTGGCGCTGACCGGCGAAGTGCATTTCAGGATTGAAGGCAGGAAAATAATTGTATCACCATAA
PROTEIN sequence
Length: 246
MLSRQGNIKVLKLDNGSLSYTGQGMKKSANNETVFNTISTPRGGQYQVTLSDGTKVWLNAASSISFPVAFTATGRSVSVTGEAYFEVAHDRHRPFKVQINNSEIEVLGTHFNVNAYEDEATVRTTLLEGKIKQTTKDGTLQKILLQGQQSDIRKNGEISVSSNVDTEEAVAWMQGNFQFRSADLRAVLRQVSRWYDVDIEYKGNVDLHFTGQLPRSENASTLFENLALTGEVHFRIEGRKIIVSP*