ggKbase home page

scnpilot_p_inoc_scaffold_14599_9

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2414..2845

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QD01_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 116.0
  • Bit_score: 76
  • Evalue 2.60e-11
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 116.0
  • Bit_score: 76
  • Evalue 7.40e-12
Possible transcriptional regulator, XRE family {ECO:0000313|EMBL:CAE28769.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 116.0
  • Bit_score: 76
  • Evalue 3.70e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGACGTCGTCTCATTTTGAGCTTGACCACCCAAAGAGCGAAGCAGCTTCCGCATTCGTGGCGGAAGTGGGCCAGCGGCTTCAGCGCGCCCTCCTAGAGCGCAAGGAAATTGACAAACTAACGCAGCAAGAGATTGCACGTCGGCTGGAAGTTGACCGGTCTCGCGTGAACAAATGTTTCTCGGGCTATGCCAACCTGTCGCTGGAAAGCCTTGCGGAGCTTTGTTGGGCAATGGACATCGAACCGGAGATAGCCTTCATACAAATTCTCCGAGATAATCCAAATTTTTACAAGGCTCGGCTGCCTACGACGCATCCTAAATTCGCAGAGGCAACAACAACCCCTTCTCAGGAAATTCAGCCGGTGCAAGCTACCCGGGCGGTCACCGGGTCCGGCGTAAGTAATAGATTTGAGTACAGTTATGCTGAGTAA
PROTEIN sequence
Length: 144
MTSSHFELDHPKSEAASAFVAEVGQRLQRALLERKEIDKLTQQEIARRLEVDRSRVNKCFSGYANLSLESLAELCWAMDIEPEIAFIQILRDNPNFYKARLPTTHPKFAEATTTPSQEIQPVQATRAVTGSGVSNRFEYSYAE*