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scnpilot_p_inoc_scaffold_12909_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2049..3896)

Top 3 Functional Annotations

Value Algorithm Source
Cell wall surface anchor family protein n=5 Tax=Listeria monocytogenes RepID=Q4ESJ2_LISMN similarity UNIREF
DB: UNIREF100
  • Identity: 28.7
  • Coverage: 631.0
  • Bit_score: 258
  • Evalue 1.60e-65
Internalin similarity KEGG
DB: KEGG
  • Identity: 29.7
  • Coverage: 626.0
  • Bit_score: 269
  • Evalue 3.30e-69
Mucus-binding protein, LPXTG-motif cell wall anchor {ECO:0000313|EMBL:CCC78381.1}; TaxID=220668 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lact similarity UNIPROT
DB: UniProtKB
  • Identity: 30.3
  • Coverage: 548.0
  • Bit_score: 244
  • Evalue 3.30e-61

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Taxonomy

Lactobacillus plantarum → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1848
AATCAACCAGCAACTGTAACTAAAACAGTTACAGGTACTAGTTCAAATCTTTTAGGGTCTGTTACAGTTAATAAATCTTTTTCAGATAACGCAGCAACTGAAGTTTCATTTAAGCTTCTCAAAAACAATGTGGTCATTAACACATTAACAACACAAAACCATTCGTTAGTATTTTCAAACCTTGTTCCTGGTAATTATTCAGTTCAAGAGGTGACTCCTGCTCATTATACTTCTTCAATTGCAAATGGTACTTCATTTACACTTACTTGCTCTGAAAATAAAGTGCTTAATGTCACCAATACTGCTATCCCAAGAACCGTCTTAACTGTGCACCATGTTTCTGAAGCAAATGTAACCTTAGCAGCAGATCAAACCTTTAGTGGTTATGCTGAAGAAAATTATTCTATTAATGCAGCAACCATTCCACACTACACCGTTTTAACAAAACCAGCTACAGAAACTGGATTATTTGGAAATTCTAACTTTGAAGTAACTTATGTTTATAAGGAAGATCCAAAATCAAAAGTTACTGCCATCTATGTTGATGAAGATGATAATGTTCTTGCTGCTCCTGAAGAAGTAGTCAATTATGTTGGCCAATCTTATACGACGGCAGCTAAAACAATTAATCATTATGCACTAATTGATACACCTGTAAACGCAACTGGAACACATGATTCAAGTGATATCACTGTTAAATATATTTATGTTGAAAACGATAAATCAACCGTATACGTTTACTATGTAGATGAAGATAATAATACACTTTCTCCTTCTGACTCAATGAGTGGCTATGCAGGCGAAAGTTATACAACAAGTCCAGCTGTGATTGCTCATTACACTTTAATTACTACTCCAGACAATGCTAACGGCATCTATGCAGAAGATGATGCAACCGTAACGTATGTTTATCGTGAAGATCCAAAGACTACTATCACTATAAAACATCAAGATGCTGAAGGCCATGACCTTGTAGCGATTGCAACCATCAGTGGATATGCTGATGAAGCTTATTCAACATCTTCACAAAGTATACCAAACTACACTTTAAGCTCTACACCTGCTAATTCAAATGGTGTTTACGGTGATTCTCCATTTGATGTTGTTTATGTATATACACCAGATGATAAATTAGTTTTAACAGTTAAGCATGTTGATGAAGACAATGTATCAATTGCTTCTGATGATATCATCAAAGGCTATCCACTTGATCCTTATACAACAAGTTCTAAATCAATTAATGGCTATCAACTAAAAACCACACCAGAAAACGCTTCAGGAAGCTTTGGTGAAACTAGTTTCGATGTAATCTATATCTATGAAAAAGTAGAAACAACTGAACCTGAAACTGAAACTCAAACACAACCATCTACACAACCACCAGTTGTACCGGAACAACCAATCGGTCCACAAGGAACCGTTTTAGTAAATTATGTGGATACTGAAGGTAATACTCTTGGAAGTTCATTCTCTTTCACTGGTAGCGTTGGCACTTTATATCAAACCTCTTCAAGATCATTTGATGGCTACTCATTAGTTGAAACACCTTCAAATGCAAGCGGTTCATTTATTGATGGTTCTATAACTGTGAGCTATGTTTATTCAAATGGTGAAATACTAACGAACGAAGATACACCACTTGGTGAAGCAATTGCGCCATTCAACTTTGACAGCTTCTATGACAATATGGAAATGACAACAGAAGCTGAAGAGTTTATCGTAGACGATGAAGAAACCCCACTTGCTGATGCTCTTCCACAGACTGGTCAAGCATCTCCAGAATTATTCTATGGTTTAGGTAGCTTAATTACTGCAGCTGGCGTTTTCCTTAAAAAAAGAAGTAAATAG
PROTEIN sequence
Length: 616
NQPATVTKTVTGTSSNLLGSVTVNKSFSDNAATEVSFKLLKNNVVINTLTTQNHSLVFSNLVPGNYSVQEVTPAHYTSSIANGTSFTLTCSENKVLNVTNTAIPRTVLTVHHVSEANVTLAADQTFSGYAEENYSINAATIPHYTVLTKPATETGLFGNSNFEVTYVYKEDPKSKVTAIYVDEDDNVLAAPEEVVNYVGQSYTTAAKTINHYALIDTPVNATGTHDSSDITVKYIYVENDKSTVYVYYVDEDNNTLSPSDSMSGYAGESYTTSPAVIAHYTLITTPDNANGIYAEDDATVTYVYREDPKTTITIKHQDAEGHDLVAIATISGYADEAYSTSSQSIPNYTLSSTPANSNGVYGDSPFDVVYVYTPDDKLVLTVKHVDEDNVSIASDDIIKGYPLDPYTTSSKSINGYQLKTTPENASGSFGETSFDVIYIYEKVETTEPETETQTQPSTQPPVVPEQPIGPQGTVLVNYVDTEGNTLGSSFSFTGSVGTLYQTSSRSFDGYSLVETPSNASGSFIDGSITVSYVYSNGEILTNEDTPLGEAIAPFNFDSFYDNMEMTTEAEEFIVDDEETPLADALPQTGQASPELFYGLGSLITAAGVFLKKRSK*