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scnpilot_p_inoc_scaffold_12956_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2891..3793

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00037AA505 similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 294.0
  • Bit_score: 410
  • Evalue 1.60e-111
  • rbh
transcriptional regulator LysR family similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 294.0
  • Bit_score: 407
  • Evalue 2.90e-111
Transcriptional regulator LysR family {ECO:0000313|EMBL:AJK50600.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 294.0
  • Bit_score: 407
  • Evalue 1.50e-110

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Taxonomy

Burkholderia glumae → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGCCGCACGCCGAGCCCCCATGGGAGTGGTACCGCAGCTTTCTGCAGGTGCTGGAGTCCGGATCGCTTTCGGCGGCCGCGCGCACGCTGGGGCTCACGCAGCCCACGGTGGGCCGGCACATCGGCGGGCTGGAGGCGGCACTGGGCCTGGGCCTGTTCACGCGCTCGCCCGAAGGCTTGGCGCCCACCGACGCCGCGCTGGCGCTGCAGCCCTATGCGCGCGACATCGCGGCCACGGCGGCGGCATTGCGCCGCGCCGCCAGCGGCCATGGCGACGGGGTGCGTGGCACGGTGCGCATCACGGCCAGCGAGATCGTAGGGGTGGAAGTGCTGCCGCCCATCCTGGCGCGCCTGCGCACGGCGCACCCGCAGCTGGCCATCGAGCTGGCGCTGTCGAACCAGCCCGACGATCTGCTGCGCCGCGAGGCGGACATCGCCTTGCGCATGTTCATGCCCACGCAGGGCGCGCTGATCGCCCGCAAGGTGGGCACCATCGAGCTCGGCCTGCACGCGCACGCCGACTACCTCGCGCGCCACGGCACGCCCGCATCGCTGAAGGCCCTGGCGCACCACGCGCTCATCGGCTACGACCGGGAGACCGCGTACATCCGCCGCATGGGCGGAAAACTGGGGGGCCTGGGCCGCAACCACTTCAGCCTGCGCGCGGACAGCGACCTGGCGCAGCTCGCCGCCATCCGCGCGGGCTATGGACTGGGCATCTGCCAGGTGCCCCTCGCGGCGCGGGACGCGCGCCTGGTGCGTGTGCTCGGGCGGCAGCTGTCGCTGCAACTCGACACCTGGGTGGTGATGCACGAGAACCTGCGCGGCAGCCCGCGCTGCGCGGCGGTGTTCGATGCGCTGGTGGCGGGCCTGGCGGCCTACATCGGCCCCGCGCCCGGCTGA
PROTEIN sequence
Length: 301
MPHAEPPWEWYRSFLQVLESGSLSAAARTLGLTQPTVGRHIGGLEAALGLGLFTRSPEGLAPTDAALALQPYARDIAATAAALRRAASGHGDGVRGTVRITASEIVGVEVLPPILARLRTAHPQLAIELALSNQPDDLLRREADIALRMFMPTQGALIARKVGTIELGLHAHADYLARHGTPASLKALAHHALIGYDRETAYIRRMGGKLGGLGRNHFSLRADSDLAQLAAIRAGYGLGICQVPLAARDARLVRVLGRQLSLQLDTWVVMHENLRGSPRCAAVFDALVAGLAAYIGPAPG*