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scnpilot_p_inoc_scaffold_13016_7

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3297..3872)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein n=1 Tax=Acidovorax radicis RepID=UPI000237552A similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 210.0
  • Bit_score: 137
  • Evalue 1.30e-29
Putative methyl-accepting chemotaxis protein MCP {ECO:0000313|EMBL:KFC70966.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="B similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 206.0
  • Bit_score: 232
  • Evalue 4.10e-58
methyl-accepting chemotaxis sensory transducer similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 197.0
  • Bit_score: 131
  • Evalue 3.40e-28

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
GCCCAGCGCTCGGGCGAGGCGGCCAAGGACATCTCCGGGCTGATCTCCTCCTCCAACACCGAGGTCGGCGCCGGGGTGAAGCTGGTGCGCCAGGCCGGCGACCAGCTCGCCCGCATCCTGGAGGCCTCGCAGAAGGTCGCCGCCACCATCGCCGACATCTCGGCCGCCTCGGGCGAGCAGGCCAACGGCATCGACGAGATGAGCCAGGCCGTCGCCCATCTCGACGAGATGACCCAGCAGAACGCCGCCCTGGCCGAGCAGAGCGCCGCCTCCGCCAACGCGCTCTCCGGCCGCATCGGACAGCTCAACGACCTCGTCGCAACCTTCCGCACCGGCCGCGAGGCGGTGGGGCAGACCGGAGCTCCCCAGCCGCTGCCGGCAGCCGGACCGCGCCCGGCCCGGCCGGCGCCGCGCCCCATGCTTCGCCCCGCCGCCTCCGCCCCCGCGGCCGGCGAACCCGAGCCCGAGCGCCTGCGCCAGCTCGCCGAGGCCGCCTTCGTCCAGTCCAGGACCGCCCCGGCCCCGCGCAAGGTCGCCAACGGACGCGCCCAGGACTCCGGATGGGAAGAGTTCTGA
PROTEIN sequence
Length: 192
AQRSGEAAKDISGLISSSNTEVGAGVKLVRQAGDQLARILEASQKVAATIADISAASGEQANGIDEMSQAVAHLDEMTQQNAALAEQSAASANALSGRIGQLNDLVATFRTGREAVGQTGAPQPLPAAGPRPARPAPRPMLRPAASAPAAGEPEPERLRQLAEAAFVQSRTAPAPRKVANGRAQDSGWEEF*