ggKbase home page

scnpilot_p_inoc_scaffold_16896_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(239..652)

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS3/IS911 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F881_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 127.0
  • Bit_score: 147
  • Evalue 8.90e-33
Transposase IS3/IS911 {ECO:0000313|EMBL:EHS51008.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 127.0
  • Bit_score: 147
  • Evalue 1.20e-32
Transposase IS3/IS911 similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 71.0
  • Bit_score: 129
  • Evalue 5.40e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGAAGTCCCGAGGTCCCTATCGCCGGCATTCGACGCCGTTTGAATTGCAGCTTTGCCAGAATATCCGAAACGGCGTCATCGGGCGGCGCGATGCACAGCGCACTTATGGCGTTTCGGCCAACCTCATCCAGTTATGGCTAACGCAGTTCGATCGCGGCGAACTGAACGATGAAGAGGCAGAGGCCAGCGTCATCGCGGAGTATGAGGCCCACAACCACAAGCGTGTCGCCCGCGTCATGCGGGCCAACGGCAAGCTTCTCTTCCACCTCATCAGCCTCCTCAGGGCCGGCAAGCAGGAGACCGTGCTACACGCAACGCAGACCGGATTTGCCGATGTCACAGCGGCGTTGAAACCGTGCCTAGGCTATGCGAAACTGAACCGCACCGAGTTTGCCGGAGACCCCAACTCGTGA
PROTEIN sequence
Length: 138
MKSRGPYRRHSTPFELQLCQNIRNGVIGRRDAQRTYGVSANLIQLWLTQFDRGELNDEEAEASVIAEYEAHNHKRVARVMRANGKLLFHLISLLRAGKQETVLHATQTGFADVTAALKPCLGYAKLNRTEFAGDPNS*