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scnpilot_p_inoc_scaffold_13180_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 368..1018

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Cro/CI family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFZ7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 199.0
  • Bit_score: 326
  • Evalue 2.20e-86
  • rbh
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:EYR79309.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 199.0
  • Bit_score: 326
  • Evalue 3.10e-86
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 209.0
  • Bit_score: 238
  • Evalue 1.30e-60

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGCCTTGGGTCCGAAAAAGCGGACCGACGGAAGCCGGATCGGGAGCGGGTATGGCGTCTGAAATGGGTCTGGAAGCGGAAACGGCTGCCGTGGGCGAGGACACGGTCCTGGGCGAACGCATCCGCGGCTTGCGCAAGCGACGAAAGATGACACTGGCGCAACTGGCCGAGAGCGCCAATCTTTCGACGGGCTATATCAGCCAGATCGAACGCAAGCTTGCTTATCCCTCCATCCCGGCCCTGGTGAACATCGCCAAAAGCCTCGGCGTCACCGTGCAATGGTTTTTCGCCGGCGCCTCGCCGGTGCCGCAGGAGGAGCATGGATATGTCGTGCGCCAGGGCAACCGGCTGAAAATCCAGTACGAACACGGCATCGTCGACGAGCTGGTGACGCCGAAGATGAGCCTGCAGGTCGAAATGATCTACACGCGCCTGCCGCCCGGGACGGAAAGCGCGGAAAGCTATACCCATGCGGGCGACGGCGTCGGTTTCGTCATTTCGGGCGAGCTGGAAATATGGGTCGGCGAACGCCATTTCCATCTCCATGAGGGCGACAGCTGCTCCTATTCCTCGGGAGAGCCGCACCGCTACCGCAATTCCGGCTCACGCGAAACGATCGTCGTCTGGGCCATCAGCCCGCCGAGTTTTTAG
PROTEIN sequence
Length: 217
MPWVRKSGPTEAGSGAGMASEMGLEAETAAVGEDTVLGERIRGLRKRRKMTLAQLAESANLSTGYISQIERKLAYPSIPALVNIAKSLGVTVQWFFAGASPVPQEEHGYVVRQGNRLKIQYEHGIVDELVTPKMSLQVEMIYTRLPPGTESAESYTHAGDGVGFVISGELEIWVGERHFHLHEGDSCSYSSGEPHRYRNSGSRETIVVWAISPPSF*