ggKbase home page

scnpilot_p_inoc_scaffold_13183_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2495..2938)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Oceanimonas smirnovii RepID=UPI0003696BB3 similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 131.0
  • Bit_score: 227
  • Evalue 7.20e-57
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 131.0
  • Bit_score: 221
  • Evalue 1.90e-55
Integrase {ECO:0000313|EMBL:AKC80591.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 134.0
  • Bit_score: 221
  • Evalue 7.20e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGCCCCTAACCGACGCCAAGATTCGCAACGCGAAGCCCGCAGACAAGCCGCAGAAGCTGGCGGACGGCGGCGGGCTGTACCTTGAAGTTCGACCGACCGGCGCGAAGTTGTGGCGCTACCGCTACCGCATCGCGGGCAAAGAAAACGTCTTTGCCGTCGGCGAGTACCCGACCATCGGCCTATCGGACGCACGCGACGAACACCGCAAGGCGCGGGCATTGGTCGAACAAGGCATTCACCCTTCCCACAATCGACAGGCCGAACGGCTGGCGAACGTCACGGCCAACGCAAACACCTTCGAAGCCGTCGCGCGGGAGTGGATAGCGAAGAAGTCGGCAGGATGGACGCCGTACTATCTGCGGCAGGTTGAACGCTTCATGGCCGCCGACGTTTGCCAACATGCTTTCGATTCTGTCGCGCATCCTGTCGGACAGCGAACTTGA
PROTEIN sequence
Length: 148
MPLTDAKIRNAKPADKPQKLADGGGLYLEVRPTGAKLWRYRYRIAGKENVFAVGEYPTIGLSDARDEHRKARALVEQGIHPSHNRQAERLANVTANANTFEAVAREWIAKKSAGWTPYYLRQVERFMAADVCQHAFDSVAHPVGQRT*