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scnpilot_p_inoc_scaffold_13278_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(173..862)

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T9V1_PHYPA similarity UNIREF
DB: UNIREF100
  • Identity: 29.7
  • Coverage: 165.0
  • Bit_score: 62
  • Evalue 4.80e-07
hypothetical protein; K12590 exosome complex component RRP46 similarity KEGG
DB: KEGG
  • Identity: 29.7
  • Coverage: 165.0
  • Bit_score: 62
  • Evalue 1.50e-07
Predicted protein {ECO:0000313|EMBL:EDQ59858.1}; TaxID=3218 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physco similarity UNIPROT
DB: UniProtKB
  • Identity: 29.7
  • Coverage: 165.0
  • Bit_score: 62
  • Evalue 6.70e-07

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Taxonomy

Physcomitrella patens → Physcomitrella → Funariales → Funariidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 690
ATGTCCGCCCCTATGGCCGACGTCCCCACATCGGTGCCGCAGATGCACCAGACGCTGAACTTCAACTGGGAGACGCAGCCCGTGCTTGAGTCCCGCGCGCGGCCCGACGACCGGAGCTTCGACGAGTTGCGCCCGCTGACGTTCGCGCCGACCAACTTCACCCGCGCCGACGGCTCAGTGCGCCTCACCGTCGGCGGCACCGTCGTGCTCGCCGCCGTTTCGGGTCCGCTTGCCACGGACGCGTCCCGCGAGGACACGCACGCCGCCGTGCTCGACGTCGTTGTGCGCGGCCCCGTCTCTGGCGCAGGCGGCCACATGACCCCTGCGGAGCTCGCGGTCGCCAACCTCATCCGCTCCGTTTTCACTGCCGCCGTCGCCGTCGACTCGTTCCCGCGCACCAAGATCGCCGTACGTCGACAAATCGTGATGCAAAACTACACATCCACGGACTTAAATTACACATATCACACACTGTTGTCCCCATGTGCTGTTTCCGTTGCATGCAATCTCGTCGCAATCCTCCCATCTTACATTCTCGCTTTGTTCTCGCTGTCTGTCTGTTACTGTTCTGTAGGTGACTGTGCACATCATCTCCGACGCCGGCTCCGTCGCCGCAGCGTGCGTGAACGCCGTGGCCGCCGCTGTTCTGGACGCCGCGCTGCCGTCGCGCTTTTCCCCCGTCGCCGTTGA
PROTEIN sequence
Length: 230
MSAPMADVPTSVPQMHQTLNFNWETQPVLESRARPDDRSFDELRPLTFAPTNFTRADGSVRLTVGGTVVLAAVSGPLATDASREDTHAAVLDVVVRGPVSGAGGHMTPAELAVANLIRSVFTAAVAVDSFPRTKIAVRRQIVMQNYTSTDLNYTYHTLLSPCAVSVACNLVAILPSYILALFSLSVCYCSVGDCAHHLRRRLRRRSVRERRGRRCSGRRAAVALFPRRR*