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scnpilot_p_inoc_scaffold_16144_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1038..1706)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003829101 similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 246.0
  • Bit_score: 275
  • Evalue 3.50e-71
Lytic transglycosylase {ECO:0000313|EMBL:KIZ46699.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas pa similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 245.0
  • Bit_score: 262
  • Evalue 4.30e-67
putative lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 245.0
  • Bit_score: 253
  • Evalue 5.20e-65

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCAGATTCGCGGCCTGACAGTCGGACTGGCGATCGTTGCGACTGCGTTCGTGAGCGTTCGCTCGCAGGATCTTCCGCTGCCGCGGATGGCCACCGTCGACGCGTCGGGCCGTATTGTACCTATGGCGCCGGCACCCGCTCCGCCGACGCAAGTCGATAGGGCAGGGCGCACGCCACCCTGCTCGACCGACAAGCCGCTGCCGCCTGAGGCCGCACGCGCTCTGGTGACTCGGATCGCCAGCGAGGAAGATTTCTATCCCGACTTCGTGCTCTCGGTCGCCAAAGCCGAAAGCCGGTTCAACTCGGTGGCGTTCTCCAAGAAGGGTGCGTTCGGGCTGATGCAGCTGATGCCGGAGACGGCAAAGCGCTTCCAGGTCGACCTTTGCGATCCCGCCGGCAATATCCGCGGCGGGATCCGCTTCCTGCGCACCCTCCACGAGAAGTACCGCAACCCGTTCTATATCCTCGCGGCGTACAACGCCGGCGAGGATGCGGTCGCGAAAAGCCGCGGCGTGCCGGCCTATCCGGAGACCGTGCGCTACGTCGCCGAGGTCATCAACGACTTCTACGCCTTGCCCGCGCCCGGCCGCCCGGTCGCCGGCAGCTCTCCGTCGAAGGCACCGGCAGGCGCTGGCTGGAACGACGGCTTCGTCATGCACATCGACTGA
PROTEIN sequence
Length: 223
MQIRGLTVGLAIVATAFVSVRSQDLPLPRMATVDASGRIVPMAPAPAPPTQVDRAGRTPPCSTDKPLPPEAARALVTRIASEEDFYPDFVLSVAKAESRFNSVAFSKKGAFGLMQLMPETAKRFQVDLCDPAGNIRGGIRFLRTLHEKYRNPFYILAAYNAGEDAVAKSRGVPAYPETVRYVAEVINDFYALPAPGRPVAGSSPSKAPAGAGWNDGFVMHID*