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scnpilot_p_inoc_scaffold_16194_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 433..966

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NRY5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 329
  • Evalue 2.10e-87
  • rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; A similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 329
  • Evalue 3.00e-87
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 174.0
  • Bit_score: 266
  • Evalue 4.80e-69

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGACTCAGGCGGCGCGCATCTGCGTTGCGAAAGTCGGCGCCGCGCACGGTGTGCGCGGTGAAGTGAGGCTGTGGCCGTTCACCGAAGACCCGATGTCGGTGATCGACTATGGATTGCTTTCGACCAAAGATGGCGCGCGCCAGTTCGAAGTGGTGCGCGCCCGGATCGCGAAAGACCATCTGGTCGCGGTCATCAAGGGCATCTCCACGCGCGAGGATGCTGAACGCATCAATGGCCTTGAGCTTTACATCGATCGCGACAAACTGCCTGAAACCGAAGAAGGCGAATACTACCACGCCGACCTGATCGGATTACGCGCGCTCGATCCCGCAGGGGCCGAGATCGGCAAGGTGCTTGCGATCCATAATTTCGGCGCGGGCGACATTATCGAGATTGCTCCGCCGCAAGGGCCGACATGGCTGCTGCCGTTCAGCAACGAGGTCGTCCCGACTGTCGATCTCGCAAGCGGCCATGTGGTGATCGTGAGACCGCAGGAGATCGACGGCGATTCTCCGCAGAACACGGATATCTGA
PROTEIN sequence
Length: 178
MTQAARICVAKVGAAHGVRGEVRLWPFTEDPMSVIDYGLLSTKDGARQFEVVRARIAKDHLVAVIKGISTREDAERINGLELYIDRDKLPETEEGEYYHADLIGLRALDPAGAEIGKVLAIHNFGAGDIIEIAPPQGPTWLLPFSNEVVPTVDLASGHVVIVRPQEIDGDSPQNTDI*