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scnpilot_p_inoc_scaffold_16319_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2806..3312)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase dbp2 n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) RepID=R4X798_TAPDE similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 161.0
  • Bit_score: 264
  • Evalue 8.00e-68
LALA0S09e04742g1_1 {ECO:0000313|EMBL:CEP63888.1}; TaxID=1245769 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 161.0
  • Bit_score: 264
  • Evalue 1.10e-67
DEAD/DEAH box helicase-like protein similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 161.0
  • Bit_score: 157
  • Evalue 3.90e-36

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Taxonomy

Lachancea lanzarotensis → Lachancea → Saccharomycetales → Saccharomycetes → Ascomycota → Fungi

Sequences

DNA sequence
Length: 507
ATGGCCATGTCCGGGCGCGACGTCATCGGCATCTCCGCCACGGGCTCTGGCAAGACGCTCGCGTTTGTGCTGCCGGCCATCGTGCACATCAACGCGCAGCCTCTGCTCAAGCCCGGAGACGGGCCCATCGTGCTCATCCTGTCGCCCACGCGCGAGCTGGCGATGCAGACGCTCAAGGAGTGCGACAAGTTCGGCTACACCTCGAAGCTCAAGTACGCCTGCGTCTTCGGCGGCGTCCCCAAGGGCGAGCAGGCGCGCGACCTGCGCCGTGGTGTCGAGATCCTCATCGCCACTCCGGGCCGCCTCATCGACTTTCTCAACACCAACACCACAAACCTGCGCCGCGTGACGTACCTCGTGCTGGACGAGGCCGACCGCATGCTGGACATGGGCTTCGAGGACCAGATCCGCAAGATCGTGTCGCAGATTCGCCCGGATCGTCAGACCCTGCTGTGGTCCGCCACCTGGCCCCGCGAGATTCAGGTGCGTTATACCATATCACTCTGA
PROTEIN sequence
Length: 169
MAMSGRDVIGISATGSGKTLAFVLPAIVHINAQPLLKPGDGPIVLILSPTRELAMQTLKECDKFGYTSKLKYACVFGGVPKGEQARDLRRGVEILIATPGRLIDFLNTNTTNLRRVTYLVLDEADRMLDMGFEDQIRKIVSQIRPDRQTLLWSATWPREIQVRYTISL*