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scnpilot_p_inoc_scaffold_14958_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..1587

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: LOW QUALITY PROTEIN: tenascin-X-like n=1 Tax=Haplochromis burtoni RepID=UPI0003BDAA02 similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 154.0
  • Bit_score: 134
  • Evalue 3.00e-28
Predicted protein {ECO:0000313|EMBL:BAJ94073.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP similarity UNIPROT
DB: UniProtKB
  • Identity: 30.2
  • Coverage: 311.0
  • Bit_score: 136
  • Evalue 1.10e-28
TNC; tenascin C; K06252 tenascin similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 146.0
  • Bit_score: 124
  • Evalue 7.40e-26

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Taxonomy

Hordeum vulgare → Hordeum → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1587
CTCGCCACGTCCACCACAAATACCTCCACCACCACGGCCCCTGCGCCTGCGACTGCTTCGGCCGCCCACGCGAACGCGAATGCGAACGCCACTGCGAGCAACGCCACGAGCAGCAACGGTGCGGTGCTGACGTCTCCGTCCGCGTCGCCCACCGCGTCGACGGCCAACGTGACGTCGTCGCCGCTGACGGCCGAGCTGGCCGTGAAGCCGCTCTTCAACAACACTGAAGTTGCAAGCCTCGTCGCTGCGCTCAACGCCTCGGCCTACTCGCCCACGCACGACTCTGAGCAGCCCATCGGGTACTCGGCGACGGGCTTCGCGCTGCCCGAGACGCTCTCGGCGCTGGTCAAGCCCTGCGGCGGCGAGTCGCACGGCTGCGGTCAGCACGGGCTGTGCGTCGAGACGGCCGGACAGATGCAGTGCGTGTGCGAGCCTGGCTACACGGGACCGGACTGCTCGCTCGTCACTGGCGGCCAGCTCTGGCACCGCTGCCCGCAGGCCTGCAACAAGCGCGGGCTGTGTCTTCTGGGCCGTTGCTACTGCGATCTGGGCTTTCAGGGTCCCTCGTGCGAGGAGAAGATCGACATCCCGTGCCCAAACAACTGCTCCGGCTACGGCCAGTGCTCGTTCGGCAAGTGCTTCTGCCAGCCCGGCTTCGCGGGTCCCGCCTGCGACAAGATCATCCCCTGCTCCAAGCTCTGCGGCGCGCACGGCATCTGCTTCAAGTCCCAGTGTGTGTGCGCCAAGGGCTACGCTGGTGAGTTCTGCCAGCTGCCCTCGGTGCGCCTCGGCGCCGGCCCGTCGCTACCCGCCGCGCCTATCGGCGACGCCTTCAACGACACGTCGCTCTTCCACCACTTTCTCGAGACGGGCGCGCGCGCCGCGACCGATGACGAAGGCCTCGCCGTCCTCGTCGAAGCCGACGCCGACGCCGACGCTGACGGCACCGCCGCGGCCCACGCCGACGCCGACGCCGACGCCGAGACAGCTGCGCTGTCGCTGCTCGAGACTGCGTCGACCGCGGCTGCCGTGCAGGCCGCGGCGTCGCTGGCGCGTCTCCCTGTGTCGATCACGGTCGCGCCCGACGAGGCGTCCTCGGCCGCCTGCACGGACTCGTGCGGCGCACACGGCCGCTGCATCGCGGGCCGCTGCTTCTGCGAGGCCGGCTTCGCGGGCGCGGCGTGCTCGGTGCGCGTCGACGAGACGAGCGCGCCCGCACTGCTGCTGCACAACGCCTACAACACGGCACAGCTCTCGTCCACGGGCGCCGACGCGACCGTGGGCTTGGGAGCGAGCGTGGCCGCTCTGGCCGAGCGCTGGCGCCGCCGCGTGTCGGGTGCGCTGGGCGCCACGGCCACGCTCGTGCCTCTGGGCGCGGACTGGACGCTGTCACCGCTCACGCTCGCCGCCGCCGCGCTCGCTGCGGGCGCGCTGGTCAACTATCTCATGCAACGCCTCGCTGAGAGCAAGACGGCGCGCCTCGAGGCCGCCGCGCGCGACACGCACATGATGCCGCTGCTGCGCCCCGCCACCTCCTCCGCTGCCGCCGCTGCTGCTGCTGCGGCTGCTGTGGCTGAGGGCAAGTAA
PROTEIN sequence
Length: 529
LATSTTNTSTTTAPAPATASAAHANANANATASNATSSNGAVLTSPSASPTASTANVTSSPLTAELAVKPLFNNTEVASLVAALNASAYSPTHDSEQPIGYSATGFALPETLSALVKPCGGESHGCGQHGLCVETAGQMQCVCEPGYTGPDCSLVTGGQLWHRCPQACNKRGLCLLGRCYCDLGFQGPSCEEKIDIPCPNNCSGYGQCSFGKCFCQPGFAGPACDKIIPCSKLCGAHGICFKSQCVCAKGYAGEFCQLPSVRLGAGPSLPAAPIGDAFNDTSLFHHFLETGARAATDDEGLAVLVEADADADADGTAAAHADADADAETAALSLLETASTAAAVQAAASLARLPVSITVAPDEASSAACTDSCGAHGRCIAGRCFCEAGFAGAACSVRVDETSAPALLLHNAYNTAQLSSTGADATVGLGASVAALAERWRRRVSGALGATATLVPLGADWTLSPLTLAAAALAAGALVNYLMQRLAESKTARLEAAARDTHMMPLLRPATSSAAAAAAAAAAVAEGK*