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scnpilot_p_inoc_scaffold_15182_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..838

Top 3 Functional Annotations

Value Algorithm Source
Protein AbrB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWB2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 278.0
  • Bit_score: 505
  • Evalue 2.60e-140
  • rbh
Protein AbrB {ECO:0000313|EMBL:EYR81764.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 278.0
  • Bit_score: 505
  • Evalue 3.60e-140
membrane protein AbrB duplication similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 278.0
  • Bit_score: 386
  • Evalue 6.50e-105
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATCGCCACCACGGTCTCCGAGGACTTCCTCGGCACCTTCCAGCGCAACTGGCCGCTGATGCTGTTCGTCGTGGTTTCCGTCATCAGCGTAAGCACCCTGTGCGGCTGGCTGATCACCCGTACCGGCATCCTGCCCGGCACGACGGCGATCTGGGGGTCCTCCGCCGGCGCCGCCTCGACCATGATGATGATGGCCGAAGCCTATGGCGCAGATGCGCGGCTCGTCGCCTTCATGCAATATCTGCGTGTCGTCTTCGTCGCCAGCCTCGCCACGCTCGTTGCCCATGTCGGCGGACATGGCGGGGCGGCGATGCCGCCGCATGCCTGGTTCGAGCCGGTACCGCTGCCGCCGCTCGTCTTAATGCTGGCGGTCGGCATTCTGAGTGGCCTCGCCGGCCAGAAGCTGCGCATCCCGGCCGGTGCTTTCCTCGTGCCCTTCGCGCTAGCCGCCGTGCTCAATGCTTCCGGCAACGTCATCATCGAACTGCCGCAATGGCTGCTCGTCATCGCCTTCACACTGCTCGGCTGGAACATCGGCCTCGGTTTCACCCGAGCCATTCTCCTGCATGCACGCCGGGCGCTCCTGCCGACGGTCCTGTCCATCGTCGCGCTGATCAGTTTTTCAGGCCTGCTTGCCGGCCTGCTGGTCCTAATGCTCGGCATCGACCCCCTGACGGCCTATCTGTCGACCAGCCCGGGCGGGCTCGATTCCATCGCCGTCATCGCCGCTTCCAGCAATGTCGACGTCGCTTTCGTCATGGCGCTGCAGACGGCACGGCTGATCATGGTGACCCTCTTCGGCCCATCGCTTGCCCGCTTCGTCGCCAATCGCGCCTAG
PROTEIN sequence
Length: 279
IATTVSEDFLGTFQRNWPLMLFVVVSVISVSTLCGWLITRTGILPGTTAIWGSSAGAASTMMMMAEAYGADARLVAFMQYLRVVFVASLATLVAHVGGHGGAAMPPHAWFEPVPLPPLVLMLAVGILSGLAGQKLRIPAGAFLVPFALAAVLNASGNVIIELPQWLLVIAFTLLGWNIGLGFTRAILLHARRALLPTVLSIVALISFSGLLAGLLVLMLGIDPLTAYLSTSPGGLDSIAVIAASSNVDVAFVMALQTARLIMVTLFGPSLARFVANRA*