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scnpilot_p_inoc_scaffold_15182_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2530..3123)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWA7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 197.0
  • Bit_score: 379
  • Evalue 1.50e-102
  • rbh
Putative transmembrane protein {ECO:0000313|EMBL:EYR81759.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 197.0
  • Bit_score: 379
  • Evalue 2.10e-102
Putative threonine efflux protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 197.0
  • Bit_score: 334
  • Evalue 1.60e-89
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGCAGATCGAGATTTTTCTGGCGCTTCTGGTCTTCGCTTTCACCACCTCCATCACCCCCGGCCCGAACAACATGATGCTCTTCGCCTCTGGCGTGAACTTCGGTTTCGCCCGCACGATCCCGCATATGTGCGGCATCGGTGTCGGCTTCCTCGTACTGCTGCTCGCCGTCGGTTTCGGGCTCGGCGCGCTGCTCGAGGTGGTGCCTCTGGTCTATACGGTGCTGAAATTCGCCGGCGGGGCCTATCTCATCTGGATCGCCTGGAAGATCGGCACCTCGCGCTCGCTTGGCGAAGGCAAAGCCGGGTCGCGGCCGATGAGCTTCCTGGAAGCCGCCGCCTTCCAGTGGGTCAACCCGAAGGCCTGGGTCATGGCGGTTTCGGCCATGGCGACCTATACGAATGCGGCGAATTATACGATGAGCGTGCTGATCGTCGGCGTCGCCTTTGCCATCGTCAATTTCCCCAGCGTTTCCACCTGGGCCGGCTTCGGTTCGGTACTACGCCAGTGGCTCTCCGATCCGGTGCGGCTGAAGTGGTTCAACATGACGATGGCGCTGCTGCTGGTGGCAAGCCTCTGGCCGATGCTGCGCTAG
PROTEIN sequence
Length: 198
MQIEIFLALLVFAFTTSITPGPNNMMLFASGVNFGFARTIPHMCGIGVGFLVLLLAVGFGLGALLEVVPLVYTVLKFAGGAYLIWIAWKIGTSRSLGEGKAGSRPMSFLEAAAFQWVNPKAWVMAVSAMATYTNAANYTMSVLIVGVAFAIVNFPSVSTWAGFGSVLRQWLSDPVRLKWFNMTMALLLVASLWPMLR*