ggKbase home page

scnpilot_p_inoc_scaffold_15231_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2992..3456

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJN0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 150.0
  • Bit_score: 171
  • Evalue 6.40e-40
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 150.0
  • Bit_score: 171
  • Evalue 1.80e-40
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK64900.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 150.0
  • Bit_score: 171
  • Evalue 9.10e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGGCCGGCGACGAAGCGGGCACTTCCTCTCCCTCGCATGGGGGCATCGTAGTCACCGGTTCGCGCATCGGGCGTTCGACCTTCGACACGTCCACGCCGGTAACGGTTATCGGCGCGGAAACCATCTCCGCGCTGGGCCAGGTTAACCTTGGCGAGACTATCCAGACGCTGCCGCAGAACGTATCGACGGTGTCCGACACCAACGTCGGTATTGCGGCGAATAGCGCCCAGGTGAACATCGGCGCGCAGATCGCCAACCTTCGCGGCCTCAATCCCGCCAACGGCGTGCGAACCCTGACGCTGGTCGACGGTCGCCGTCATGTGCCTTCCACCACTGGCGGCGGCGTCGATATGAACCTAATCCCTTCGATCATCGTGCAAAGCATCGAAACGGTCACGGGCGGCGCATCGGCGGCTTATGGTACCGATGCCCTCGCGGGTGTGGTCAACGTCATTCTCGACAAG
PROTEIN sequence
Length: 155
MAGDEAGTSSPSHGGIVVTGSRIGRSTFDTSTPVTVIGAETISALGQVNLGETIQTLPQNVSTVSDTNVGIAANSAQVNIGAQIANLRGLNPANGVRTLTLVDGRRHVPSTTGGGVDMNLIPSIIVQSIETVTGGASAAYGTDALAGVVNVILDK