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scnpilot_p_inoc_scaffold_15352_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1030..1371)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix motif n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R3H0_XYLFS similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 105.0
  • Bit_score: 160
  • Evalue 1.10e-36
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 105.0
  • Bit_score: 160
  • Evalue 3.10e-37
XRE family transcriptional regulator {ECO:0000313|EMBL:AIC11726.1}; TaxID=155920 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella f similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 105.0
  • Bit_score: 160
  • Evalue 1.50e-36

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Taxonomy

Xylella fastidiosa → Xylella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGCAAAAACGGATCGTTGACGGCGTTGAAGTGGAGCGCGGCTCGGGCAATGTGTATGCCGATCTGGGCCTTGCGGATGCCGATGAGATGCTGGTGAAGGCACGGCTGGTGACGAAGATCAGGGAGATCATCAAGGCTCGCGGCTGGACGCAGCAGGAGGCCGCGCAGGTGCTGGGCATGGCGCAGCCCAAGCTGTCCAACATGCTTCGTGGGCGGTTCAGAGGGATCAGCGAAGCCAAACTGATGGGGTGCCTGGCAAGGCTGGGGCGGCGGGTTCAGATTGTGGTGGGGCCTGACCAGCAGCCCGAGGCGGCTGGCATGGTCGAGGTGGTGTTTGCCTGA
PROTEIN sequence
Length: 114
MQKRIVDGVEVERGSGNVYADLGLADADEMLVKARLVTKIREIIKARGWTQQEAAQVLGMAQPKLSNMLRGRFRGISEAKLMGCLARLGRRVQIVVGPDQQPEAAGMVEVVFA*