ggKbase home page

scnpilot_p_inoc_scaffold_15408_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(255..743)

Top 3 Functional Annotations

Value Algorithm Source
N utilization substance protein B homolog n=1 Tax=Rhizobium sp. CF142 RepID=J1SRS5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 160.0
  • Bit_score: 275
  • Evalue 2.60e-71
nusB; transcription antitermination factor NusB similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 160.0
  • Bit_score: 275
  • Evalue 7.20e-72
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1144314 species="Bacteria; Prot similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 160.0
  • Bit_score: 275
  • Evalue 3.60e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGAGCAAGCAGGAGCCCGGACAGCCGGTAAAGCCCGCCAACCAGCGCGGCGCAGCCCGTCTTGCTGCGGTGCAGGCGCTTTACCAGATGGATATCGGCGGCGCCGGCGTCCTCGAAGTGGTGGCCGAGTATGAAGCCCATCGCCTCGGCCAGGAAGTGGACGGCGAAACCTATCTGAAGGCCGATGCCGGCTGGTTCCGCTCGATCGTTGCCGGCGTCGTGCGCGACCAGACGAAGCTCGATCCGCTGATCGGCTCGGCGCTGCAGGACGACTGGGCGTTGTCGCGGATGGACAGCACCGTGCGCGCCATCCTGCGTGCCGGCGTCTTCGAGATCATCGAACGCAAGGATGTTCCCGTCGCGGTGATCGTCACCGAATATATGGAAATCGCCCAGGCGTTTTTCTCCGAAGACGAGCCCAAGCTCGTCAATGCCGTTCTCGACCGTATCGCCAAGCAGATACGCGGCGACCAGAAAAAGAAGGACTGA
PROTEIN sequence
Length: 163
MSKQEPGQPVKPANQRGAARLAAVQALYQMDIGGAGVLEVVAEYEAHRLGQEVDGETYLKADAGWFRSIVAGVVRDQTKLDPLIGSALQDDWALSRMDSTVRAILRAGVFEIIERKDVPVAVIVTEYMEIAQAFFSEDEPKLVNAVLDRIAKQIRGDQKKKD*