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scnpilot_p_inoc_scaffold_14659_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(551..1129)

Top 3 Functional Annotations

Value Algorithm Source
Secreted/surface protein with fasciclin-like repeats n=1 Tax=Variovorax sp. CF313 RepID=J2K9K5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 192.0
  • Bit_score: 341
  • Evalue 4.50e-91
  • rbh
Variovorax paradoxus strain MEDvA23 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27477.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 192.0
  • Bit_score: 352
  • Evalue 2.70e-94
beta-ig-h3/fasciclin similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 192.0
  • Bit_score: 340
  • Evalue 2.80e-91

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAAAAACTCATGATTGCAGTCGGCGTTTCGGTCCTGCTCGGCGCTTGCGCTGGCGGCATGGGCATGAGCGGCAGTGGCAGCAGCGGGATGTCGTCGAACCCGATGGTCGGCGGCGCCGCGATGTACCCGACGAAGGACATCGTCGACAACGCCGTGAACTCGAAGGACCACACGACGCTGGTCGCCGCGGTCAAGGCCGCCGGCCTGGTCGACACGCTGAAGAGCCCCGGACCGTTCACCGTGTTCGCGCCCACCAACGAGGCCTTCGCCGCGCTGCCGGCCGGCACCGTCGACACGCTGCTCAAGCCCGAGAACAAGCCCACGCTGACCAAGGTGCTCACGTACCACGTGGTGCCCGGCCGCATGGACGGCCCCGCGCTGATGAGCGCGATCAACGCCGGCGGCGGCAGGGCCGTGCTGAAGACCGCCAGCGGCGGCACGCTGGTTGCCACGATGAACGGCGGCAACGTGTGGGTGACAGACGCCAAGGGCGGCACCGCGATGGTCACCATCGCCAACGTGTACCAGTCGAACGGCGTGATCCACGTGATCAACAAGGTGCTGCTGCCGGGTTGA
PROTEIN sequence
Length: 193
MKKLMIAVGVSVLLGACAGGMGMSGSGSSGMSSNPMVGGAAMYPTKDIVDNAVNSKDHTTLVAAVKAAGLVDTLKSPGPFTVFAPTNEAFAALPAGTVDTLLKPENKPTLTKVLTYHVVPGRMDGPALMSAINAGGGRAVLKTASGGTLVATMNGGNVWVTDAKGGTAMVTIANVYQSNGVIHVINKVLLPG*