ggKbase home page

scnpilot_p_inoc_scaffold_14659_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1739..3058)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036A2704 similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 431.0
  • Bit_score: 722
  • Evalue 2.80e-205
  • rbh
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 431.0
  • Bit_score: 720
  • Evalue 3.00e-205
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACS17113.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 431.0
  • Bit_score: 720
  • Evalue 1.50e-204

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGAATCCGAACGCGGCACCCAAGCCCGCGGAGCGCACCGGCGACGCCGCGCCGCGCTCACGCCTTTCCCGTTTCTCCCACTGGTCCGCTTCCACCACGGCGATGCTGGTCGCCCTGGCCACGGCCTTCGCCCTGAGCCAGGCCTTCCGCACCGTCGGCTCGATGATGGCCACGCCGCTCTCGCAGAACTTCGGGCTCACGCCGCAGCAGCTCGGCATGTGGGCCGGCACCTTCCATTTCACTTTCGGCGTGATGCAGCTCGGCATGGGCGTGTCGATTGACATGTTCGGGGTGCGCCGCACGGTGCTGAGCGCCTTTCCGCTGGCCATCGCGGGCGCCGTGCTGTGCACGATGGCGCCGAGCTTCCACGCACTGCTGCTGGGGCAGGCGCTGATCGGCGTCGGCTGCGCGCCCGCGTTCCTGGCCTGCACGGTGTTCATCGCGCGGCATTTCGATGCGGCGCGTTTCACCGCGATGTCGGGGCTGGTGATGAGCATGGCCGGCATGGGCATCCTGTTCACCGGCACGCCGCTGGCGCTGCTGATCGAGGCCGCCTCCTGGCGTGCAGGCTACGCGGCGCTGGCCGGGTTCGCGGTGCTCTCTTGGCTGGTCATCTTCTGGCGCGTGCGCGAACCTGCGCGCACGGTGGTGCATGACGGCATGCAGCCGGCGCCGGCGGAGCGCCAGTCGCTGCGCAAGGCGGTGCGCGAACTGCTGCCGCTGTTCGCCATGCCCCACACGCTGGGGCTGCTGTGCTTTGCCTGCGTGTCCTACGCGGCCTTCATCACGCTGCGCGGCCTGTGGCTGGGCCCGGTGCTGCACGAGCGGCACGGCCTGTCGCTGGTGGCCAGCGGCAACGTGGCGCTGGTGATGACGGTGGCCGGCATGATCAGCCCCGCGCTGTTCGGCCGCATGGACCCGGGCGGCGCGCGGCGCGGCCGCTGGATGATGGGCTGCGCCGTCGCCGGCGCGCTGATGTTCGGCGCGATGGCGCTGACGCATTCGGCGGCCATCGACATCGGCCTGCCGATCATCTACGGCCTGCTCTCGGGCTACAGCGTGCTGCAGTACGCGTACACCAAGAACGCCTATCCGGCGGAGATGACCGGGCGCGCGATGGCGCTGCTGAACATGGCGATGTTCCTCGGCGTGTCGCTGATGCAGTGGACCACCGGCGTGGCCGCGTCATGGGCGGTGACGCACGGCGCGGAGCCGTTCCGCGCGGTGTTCCTCACGGTGGCCGGCATGCTGGCCGTGGGAACGCTCGCGTTTCTCGTGCTGCCGCGTTCGCATGGCGGTCAGTCCTCCGTGAAGCGGTAG
PROTEIN sequence
Length: 440
MNPNAAPKPAERTGDAAPRSRLSRFSHWSASTTAMLVALATAFALSQAFRTVGSMMATPLSQNFGLTPQQLGMWAGTFHFTFGVMQLGMGVSIDMFGVRRTVLSAFPLAIAGAVLCTMAPSFHALLLGQALIGVGCAPAFLACTVFIARHFDAARFTAMSGLVMSMAGMGILFTGTPLALLIEAASWRAGYAALAGFAVLSWLVIFWRVREPARTVVHDGMQPAPAERQSLRKAVRELLPLFAMPHTLGLLCFACVSYAAFITLRGLWLGPVLHERHGLSLVASGNVALVMTVAGMISPALFGRMDPGGARRGRWMMGCAVAGALMFGAMALTHSAAIDIGLPIIYGLLSGYSVLQYAYTKNAYPAEMTGRAMALLNMAMFLGVSLMQWTTGVAASWAVTHGAEPFRAVFLTVAGMLAVGTLAFLVLPRSHGGQSSVKR*