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scnpilot_p_inoc_scaffold_14664_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1459..1755

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=8 Tax=Rhizobium meliloti RepID=RL28_RHIME similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 96.0
  • Bit_score: 180
  • Evalue 6.80e-43
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 98.0
  • Bit_score: 188
  • Evalue 4.50e-45
rpmB; putative 50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 96.0
  • Bit_score: 180
  • Evalue 1.90e-43

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGTCCCGTAGTTGTGAATTGACCGGCAAGGGCGTCCAGTCGGGCAACAATGTGAGCCACGCAAACAACAAGACGAAGCGCAAGTTCCTGCCGAACCTGTGCAATGTCACGCTGATTTCCGACGCTCTCGGCCAGCGTTTCCGTCTTCGCGTTTCCGCTGCCGCGCTCCGTTCCGTCGAGCACCGCGGTGGCCTCGATGCCTTCCTGCTGAAGGCCGAAGAGAACGAACTGTCGATGCGCGCTCGTCTGCTGCGTCGCCAGATCGCCAAGAAGGCTGCTGCTGCCGTCGCTGCCTGA
PROTEIN sequence
Length: 99
MSRSCELTGKGVQSGNNVSHANNKTKRKFLPNLCNVTLISDALGQRFRLRVSAAALRSVEHRGGLDAFLLKAEENELSMRARLLRRQIAKKAAAAVAA*