ggKbase home page

scnpilot_p_inoc_scaffold_14867_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3083..3823

Top 3 Functional Annotations

Value Algorithm Source
mnmC, trmC, yfcK; 5-methylaminomethyl-2-thiouridine methyltransferase; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] Tax=RIFOXYA1_FULL_Hydrogeno similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 247.0
  • Bit_score: 410
  • Evalue 2.40e-111
FAD-dependent cmnm(5)s(2)U34 oxidoreductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037927C2 similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 247.0
  • Bit_score: 472
  • Evalue 2.80e-130
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 247.0
  • Bit_score: 408
  • Evalue 1.10e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGCTGAAAACCATTATTCCGGCCCGCCTCGAATTCAAGGACGGCGTGCCGTATTCCGCCGCCTACGGCGACATCTACCATCCCGCCGACGGCGCCGCCGGGCAGGCGCGCCACGTCTTTCTGCAGGGCTGCGGCCTGCCGCAGGCGTGGGCGCATCGCGCCCGCTTCGTCATGCTGGAAACCGGCTTCGGCACCGGGCTGAACTTCCTGGCGACCTGGGCGGCGTGGCGCGACGACCCGGCGCGCCCGGCGCGGCTGCATTTCCTGTCGGTCGAAAAGCATCCGTTCGGTGCCGACGACCTGGCGCGCCTGCATGCGCAATGGCCGGAATGGGCGGCGCTAGCCAACGAACTGCGGGCGAACTGGCCGATGCCGACGCCGGGTTTCCATCGCATCGCGCTCGACGGCGGACGGGTGCAGCTCACCCTGATGCTGGGCGAAGCGGCGGACTGCCTGCCGCAGGTCGAGGCGGGCGTCGACGCCTTCTATCTGGACGGTTTCGCCCCCGACTGCAACGCCGACCTCTGGCAGCCCGGGCTGTTTGCCGAACTCGCGCGGCTGGCGAATCCCGGGGCGGTGGCGTCGACCTACACGGTGGCGGCAGCGGTGCGCGAGGGGCTGAACCGGGCGGGCTTCGCCTGCGAAAAACGCGCCGGCTACGGCCGCAAGCGGCATTGCCTGAGTGCGCGTTTCGCCGCCAAGGCCGGCGCCGATGAATCCGCCGTGCCGCGGCGTGTCGCC
PROTEIN sequence
Length: 247
MLKTIIPARLEFKDGVPYSAAYGDIYHPADGAAGQARHVFLQGCGLPQAWAHRARFVMLETGFGTGLNFLATWAAWRDDPARPARLHFLSVEKHPFGADDLARLHAQWPEWAALANELRANWPMPTPGFHRIALDGGRVQLTLMLGEAADCLPQVEAGVDAFYLDGFAPDCNADLWQPGLFAELARLANPGAVASTYTVAAAVREGLNRAGFACEKRAGYGRKRHCLSARFAAKAGADESAVPRRVA