ggKbase home page

scnpilot_p_inoc_scaffold_15795_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1297..1830

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC24_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 177.0
  • Bit_score: 267
  • Evalue 7.60e-69
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia. similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 177.0
  • Bit_score: 332
  • Evalue 2.70e-88
50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 177.0
  • Bit_score: 267
  • Evalue 2.10e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCACGTACTGGCAAGAAACCGGTGGCCCCGGTAAATGGCGTTACGGTCACGATCAATGGTCGTGTCGTGAGCGCCAAGGGCCCGAAGGGCGAACTGAGCCTCACGCTCATGGATATCGTCAATGTAGAGCAGGGCGCCGATGGCATCGTCATCACCCCTGCCAACGACACCCGTGAGGCTCGCGCTGCCTGGGGCACCACCCGCGCGCTGATCCAGAACCTGGTCACCGGGGTGAGCGCCGGCTTCGAGAAGAAGCTCGCCATCCAGGGCGTCGGTTACCGCGCTGCAATGCAGGGCAAGGACGTCAAGCTGTCGCTGGGCTTCAGCCATGAAGTGATCTATCAGGCTCCTCAGGGTATCACCCTCGCTGTGCCCGTGCCGACTGAGATCGTCGTTACCGGCACCGATAAGCAGCAGGTCGGTCAGGTTGCGGCCGAGATCCGCAGCTGGCGTCCCCCCGAGCCCTACAAGGGCAAGGGCGTGCGTTACGCGGGCGAGCAGGTCTTCCGCAAAGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRTGKKPVAPVNGVTVTINGRVVSAKGPKGELSLTLMDIVNVEQGADGIVITPANDTREARAAWGTTRALIQNLVTGVSAGFEKKLAIQGVGYRAAMQGKDVKLSLGFSHEVIYQAPQGITLAVPVPTEIVVTGTDKQQVGQVAAEIRSWRPPEPYKGKGVRYAGEQVFRKEGKKK*