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scnpilot_p_inoc_scaffold_15986_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..1699)

Top 3 Functional Annotations

Value Algorithm Source
poly(A)-specific ribonuclease, putative (EC:3.1.13.4); K01148 poly(A)-specific ribonuclease [EC:3.1.13.4] similarity KEGG
DB: KEGG
  • Identity: 24.9
  • Coverage: 538.0
  • Bit_score: 109
  • Evalue 2.60e-21
poly(A)-specific ribonuclease, putative n=1 Tax=Toxoplasma gondii ME49 RepID=UPI000185E6D2 similarity UNIREF
DB: UNIREF100
  • Identity: 24.9
  • Coverage: 538.0
  • Bit_score: 109
  • Evalue 8.40e-21
Ribonuclease, putative {ECO:0000313|EMBL:ELR22146.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellan similarity UNIPROT
DB: UniProtKB
  • Identity: 35.3
  • Coverage: 102.0
  • Bit_score: 74
  • Evalue 7.20e-10

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Taxonomy

Acanthamoeba castellanii → Acanthamoeba → Longamoebia → Eukaryota

Sequences

DNA sequence
Length: 1698
ATGGAAGTGACCAAGTCCAACTTCGCCGAAGTGGCCGCCGAGTTGGCGACCCTGATCCCCACGGCGCGCTTCATCTCCCTGGATGAGGAGATGACCGGCATCTCGATGCCCGGCCGCGAGTTTTCCTCCGACGTCCTCGACTCGATCGAGACGCGCTACCTCAAGATGCGGACCGCCGCCATGGCCTTCAGCATCATCCAAATGGGCATCTGTCTCTTCCACGAGGACCCCGAGGACCCGAGCAAGCTCATCGCGCGCCCCTACAACTTCTACGTACTGCCGACGCGCGACTCCGACTGCGGCCCCGTCGTCCGGCTCGAGCTCTCGGCCGTCGACTTCAACACCAAGCACAACATGGACTGGTCCAAGTGGATCTCCCAGAGCGTGGGCTACGTCAACGCCGCCGCCGAGCACCAGCTCCGCGTCAAGCTGCAGCGCGACACCGAACGCGACGACGCCGCCGCGCGCGGCAAGGACACCAAGGACAACCGGCGCGCGATTACCCTGACCAAGCCCGCCGACGCCGCGTTCGTGGACGCGCAAGTCGAGGCCTTCTCGGCCTTCTACGCCGCCAACGCTGCCGAGCTCGACGCCCGCGTGGCGCGCGACGCGGCCGGCGAGGACACCAGCGAGCTGCCGCCACTCGAGCACGCCATCGCGGACTGCAACTCGTTCCTGCGCGCCGCTATCTACGAGCGCATCCGTGCCCGCTTCCCCATGCCTGACGACCGCGCGCTCGCGTTCAACTCGCGCCCCGCAAACGCCACTGCCACTGCCTCTGCCTCTGTCTCTGCCTCTGTGAGTGCGAGTGCTGCTGCGCCTGTGGCGGGTGCTGGCTGGGGCACCATCTCCTACGCTAGTCTCCTGACGCAGTCCCAGGTCGCGGCGGCCCGCGCGCGCGCGCAGGCGAAGCGGCTGGCCGAGTTCGACGCCAAGGTTGGTTTCCGCAGCATATGGAACATGCTGACGTCGTCCAAGGTGCCGATTGTGGGCCACAACTGCCTGTTCGACTTCCTCTTCATGGTCCAAGCCTTCGAGTGCGACCTCCCCGACTCGTTCGCTGGCTTCACCGCGCTCTTCAGCTCGCTCTTCCCCGTCGCCTTCTGCACCAAGTTTCTCTACGGCAGCCCCGAGTACCGCGCGCTGCCGTGCTATATCCACTCTGAGCGCACGCACTTGGAACAGCTGTTCCGCACCTTCGTCGCCGTGCAGCGCGCGCGCGAGGACGCCGACCGCGGCGCGCTGCCCGCCTTCGCCCTCCCCGAGCCCGCCCCGCAGCAACAGCAGCAGCAGGATGAGGGGGATTCGCGCGGCGCCGACGCCAGTGCGACTGTGGGCTCGCCAGTGACCGTGAGCTCGCCCGTGACCGTGAGCTTGCCAGCGGCGCCGTCGCTGACGAGCAGCCTCGCGCCCAAGGACTCGGCGTACAACGTGTTTGTGACCGAGGAGCAGCGCGCCCTGGCCATGGCGGCCGCGCCCGCCGCGATCACGCTCATCGACGAAGCAGTGTACACGGAGGAGTCTGGCCGCTTCCACGAGGCCGCGTTTGATGCCTACTGCACTGGGTACGTCTTCGCGCATGTGTACGCGGCTCTCGCGAAGGCCGAGGCCGGCCTCCTGACTCCTACCAGCAGCAGCAACAACAGCAACGCCAGCGGCGACGGCAGCGCGACTGCCGAGATCGGAAGAGCACACGTC
PROTEIN sequence
Length: 566
MEVTKSNFAEVAAELATLIPTARFISLDEEMTGISMPGREFSSDVLDSIETRYLKMRTAAMAFSIIQMGICLFHEDPEDPSKLIARPYNFYVLPTRDSDCGPVVRLELSAVDFNTKHNMDWSKWISQSVGYVNAAAEHQLRVKLQRDTERDDAAARGKDTKDNRRAITLTKPADAAFVDAQVEAFSAFYAANAAELDARVARDAAGEDTSELPPLEHAIADCNSFLRAAIYERIRARFPMPDDRALAFNSRPANATATASASVSASVSASAAAPVAGAGWGTISYASLLTQSQVAAARARAQAKRLAEFDAKVGFRSIWNMLTSSKVPIVGHNCLFDFLFMVQAFECDLPDSFAGFTALFSSLFPVAFCTKFLYGSPEYRALPCYIHSERTHLEQLFRTFVAVQRAREDADRGALPAFALPEPAPQQQQQQDEGDSRGADASATVGSPVTVSSPVTVSLPAAPSLTSSLAPKDSAYNVFVTEEQRALAMAAAPAAITLIDEAVYTEESGRFHEAAFDAYCTGYVFAHVYAALAKAEAGLLTPTSSSNNSNASGDGSATAEIGRAHV