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scnpilot_p_inoc_scaffold_16936_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1646..2356

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2TMV0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 236.0
  • Bit_score: 427
  • Evalue 7.60e-117
  • rbh
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27872.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 234.0
  • Bit_score: 428
  • Evalue 6.30e-117
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 234.0
  • Bit_score: 426
  • Evalue 3.70e-117

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGTCCCAACCCCCGTCTGATGCCATTGTCGCCGTCGAGCATGTCTTCAAGTCCGTGACCGACTCGGCCGGCACGCTGGACATTCTGCAGGACATCCATTTCACCCTCGGCGCGCGGGAAACCGCCGCCATCGTCGGCGCCTCGGGTTCGGGCAAGAGCACCTTGCTTTCGATCATCGCGGGGCTGGACACGCCCACTCGCGGCACTGTCAGGCTAGCGGGCGACGACCTGTTCGCCATCGACGAGGACGAGCGCGCCGCCGTGCGCGCGCAGCGCGTGGGCTTCGTGTTCCAGAGCTTCCAGCTGCTGGGCAACCTCAGCGCGCTCGAGAACGTGATGCTCCCGCTGGAACTGGCCAACCGCAAGGATGCCCGCAAGGCCGCCACCGAGATGCTGGGCCGAGTCGGGCTGGGCCAGCGGCTGGGGCACTACCCGAAGGTGCTTTCGGGCGGCGAGCAGCAGCGTGTGGCGCTGGCACGGGCCTTCGTGGTGCAGCCGGCCCTGCTGCTGGCGGACGAGCCCACCGGCAGCCTCGACTTCGCGACCGGCGAGCAGGTCATGAAGCTGATGTTCGATCTGAACCGCGAACTGGGCACTACGCTCGTGCTCGTTACGCACGACCGCGGCGTCGCCGACCGGTGCGAACGCCGCATCACCATCGAGGCCGGCCGCGTCGCAGGTAATGAAAAAGCTGCCGTAGCGCCCGGCTGA
PROTEIN sequence
Length: 237
MSQPPSDAIVAVEHVFKSVTDSAGTLDILQDIHFTLGARETAAIVGASGSGKSTLLSIIAGLDTPTRGTVRLAGDDLFAIDEDERAAVRAQRVGFVFQSFQLLGNLSALENVMLPLELANRKDARKAATEMLGRVGLGQRLGHYPKVLSGGEQQRVALARAFVVQPALLLADEPTGSLDFATGEQVMKLMFDLNRELGTTLVLVTHDRGVADRCERRITIEAGRVAGNEKAAVAPG*