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scnpilot_p_inoc_scaffold_17580_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1546..1860)

Top 3 Functional Annotations

Value Algorithm Source
Quaternary ammonium compound-resistance protein SugE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ESA1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 104.0
  • Bit_score: 199
  • Evalue 1.50e-48
Quaternary ammonium compound-resistance protein SugE {ECO:0000313|EMBL:EYR79864.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 104.0
  • Bit_score: 199
  • Evalue 2.10e-48
cation/cationic drug transporter similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 104.0
  • Bit_score: 171
  • Evalue 1.60e-40

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGCCCTGGATTTATCTAACGCTTGCAGGCCTTTTCGAAATCGGCTGGGCGATCGGCCTCAAATATACCGACGGCTTCACCAGGCCGCTGCCAACGGTCCTCACCGCCGGCTCGATGGTCATCTCCGTCGTGCTGCTTGGCCTTGCCGTAAAGACGCTGCCGATCGGCACCGCCTACGCGATCTGGACTGGCATCGGCACGGTCGGCACCGTGATGCTCGGCATCCTCCTCTTCGCCGAGCCGGTGACCGCCGTTCGCATGGGCTGCATCGCCCTCATCGTCGTCGGCATCCTCGGCCTGAAATTTGCGGCCTGA
PROTEIN sequence
Length: 105
MPWIYLTLAGLFEIGWAIGLKYTDGFTRPLPTVLTAGSMVISVVLLGLAVKTLPIGTAYAIWTGIGTVGTVMLGILLFAEPVTAVRMGCIALIVVGILGLKFAA*