ggKbase home page

scnpilot_p_inoc_scaffold_18084_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..507

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000361B61E similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 170.0
  • Bit_score: 290
  • Evalue 7.90e-76
Transcriptional accessory protein {ECO:0000313|EMBL:EJE53485.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 179.0
  • Bit_score: 280
  • Evalue 1.10e-72
Tex-like protein similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 168.0
  • Bit_score: 279
  • Evalue 5.20e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
AAGCCCGAGCTGTTTGCGGGCGAGAAGTTCGGCATCATCACGGTCAAGGACATCCTGGGCGAGCTGGAGAAACCCGGCCGCGACCCGCGCCCCGACTTCAAGGTGGCGCGCTTCAACGAAGGCGTCGAGGACATCCGGGACTTGAAGGAAGGCATGGTGCTGGAGGGCACGGTGAGCAACGTCGCGCAGTTCGGCGCCTTCATCGACCTGGGCGTGCACCAGGACGGCCTGGTGCATGTGAGCCAGCTCGCGCACCGCTTCGTCGCCGACGCGCGCGAGGTGGTCAAGACCGGCGACATCGTCAAGGTCAAGGTGATGGAGGTGGACGTGGAGCGCAAGCGCATCGGCCTGTCGATGAAGCTCGGCGATGCGCCCGCGCGCCAGGGCGGCCCGCGCGAGAACCGCTTCGAGGGGGCAGGGCGCAGCCAGCCGCAGGGGCGGCGCGGCAACGACGCGCCGGCACCCTCGGCCATGGCCTCGGCCTTCGCCAAGCTGCGCGGGCGCTGA
PROTEIN sequence
Length: 169
KPELFAGEKFGIITVKDILGELEKPGRDPRPDFKVARFNEGVEDIRDLKEGMVLEGTVSNVAQFGAFIDLGVHQDGLVHVSQLAHRFVADAREVVKTGDIVKVKVMEVDVERKRIGLSMKLGDAPARQGGPRENRFEGAGRSQPQGRRGNDAPAPSAMASAFAKLRGR*