ggKbase home page

scnpilot_p_inoc_scaffold_19206_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..273

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4WM45_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 174
  • Evalue 5.80e-41
LysR family transcriptional regulator {ECO:0000313|EMBL:ESR01111.1}; TaxID=1263865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 90.0
  • Bit_score: 171
  • Evalue 6.90e-40
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 90.0
  • Bit_score: 169
  • Evalue 5.30e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas chloritidismutans → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
TGGCGCATGACCGTGCAGCGCGTGTTCGAGAACGCGCTGCAGGAGCGGGAGCAAACGGTGGAGACATTCGATGTGGCGATGACGCTGGTTGCCGCCGGGTACGGGATCGCCATTGCGCCCGCCGCGAGACTGGCGAGCTACCTACGCCGAGGCATCGCCGTGCGGCCGCTGGCCGGCGCACCAACGATCGTGATGGCTTACCTGCTCCGTCGCAACGCCTCTTTGTCAGACCCCCAGGCAAGATTCGCCCGCCGCGCGCGCTTGGTGTCCTGA
PROTEIN sequence
Length: 91
WRMTVQRVFENALQEREQTVETFDVAMTLVAAGYGIAIAPAARLASYLRRGIAVRPLAGAPTIVMAYLLRRNASLSDPQARFARRARLVS*