ggKbase home page

scnpilot_p_inoc_scaffold_19206_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2224..2907)

Top 3 Functional Annotations

Value Algorithm Source
Integrase n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4UYU0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 227.0
  • Bit_score: 455
  • Evalue 4.30e-125
Integrase {ECO:0000313|EMBL:KIL04375.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas p similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 227.0
  • Bit_score: 446
  • Evalue 2.80e-122
integrase similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 227.0
  • Bit_score: 445
  • Evalue 9.60e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas stutzeri → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
TACGTGGAGCAGCGTCGCCGCATGATGCAGGACTGGGCCGATCGGCTCGACCTCTTCGAGCAGAACCAGGTCGAGGCAGCCAGCATGCCGCTCACCGTGCATCTGGAAGGCGTGCCCGCATTCCCGAGTGAGCAAACCGCAAGCGCACCCTCCACGCCGGTTGCCGCTTCGCCAATCCTGCTCGTGACGAAGCCGGGTGACGCCATGCCGTTGGTTTCTGCCGCCACACATCGGCTGCCGGCGGTTCCGCCCCCTCGATCGGCCGCGCCGCTGGTGCCCTCGGACATTCAGCGCGAGAGGATGGAGCTGTTCGATGTCTTCGAAGCGCCGCACAACCTTCCCGTCGCGGCGTTTGCCAAGATGGCGGGCAAGTCCCGCAGGTGGATCAGCTACGAGATCAAGGCGGGCAACTTGCTGGCGTTGAACGTGGGCAACCGCGGCCAGCGCGTGCCGGACTGGCACCTCGACCCACTCAGGCACGAGCTGATCCAGTCCGTCCTCAAGCTGACCAGGGGTGCGGACCCTTGGCAGCTCTACCATGCACTGCTGCAACCGCGCTCGATGCTGCGGGGGCGTTCGGCACTGGAGGGCGTGACGGCCGGCAATCTCGACAAGCTCGTCATGGCAGTGAGCACAGCCGTGAAGGAGAGCGAATGGACCTTGCCGCGAGTCGGGGTCGCCTAG
PROTEIN sequence
Length: 228
YVEQRRRMMQDWADRLDLFEQNQVEAASMPLTVHLEGVPAFPSEQTASAPSTPVAASPILLVTKPGDAMPLVSAATHRLPAVPPPRSAAPLVPSDIQRERMELFDVFEAPHNLPVAAFAKMAGKSRRWISYEIKAGNLLALNVGNRGQRVPDWHLDPLRHELIQSVLKLTRGADPWQLYHALLQPRSMLRGRSALEGVTAGNLDKLVMAVSTAVKESEWTLPRVGVA*