ggKbase home page

scnpilot_p_inoc_scaffold_18984_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..2935

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J3X0_CHLRE similarity UNIREF
DB: UNIREF100
  • Identity: 32.7
  • Coverage: 300.0
  • Bit_score: 113
  • Evalue 1.30e-21
Predicted protein {ECO:0000313|EMBL:EDP01058.1}; Flags: Fragment;; TaxID=3055 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 32.7
  • Coverage: 300.0
  • Bit_score: 113
  • Evalue 1.80e-21
WD-40 repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 244.0
  • Bit_score: 103
  • Evalue 3.80e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chlamydomonas reinhardtii → Chlamydomonas → Chlamydomonadales → Chlorophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 2934
GACGCCACCAGCGCTGCGGCCGCGCACGTCGCCGCGCAGCGCCTGCGTCTGCGCAACCCCGGCAGCGCCCGTGGCAGCGCGGTGCCTGCTGACGCGCCCCCGACTGAGCTGTCCCCTACGCTCAGCGCGGCGACGATGCTCAGCAGCGTGTCGGGCCGCCGTAACTCCGCATCGGCGACTTCTGACGCCTCCGCGACTGTGGAGTCCGTGGCGTGGGTGCCCGAGCCCGTGTTCGAGCCGGTCGTCGCTATCCGCGGCATGCAGGCTCTGACCACGTGCCTCAAGTGGGCGCCGTTACCGCGCGCGTATTTGGCCGATATTGCGCAGGAGTTTAACCTTTGTGGCACTGCGACTACGGCGAACAAGCCTGCTGGCGGTGCGAAGATGCCCGCCACGAGCACCGCCTCTCAGAGCAAGCATGATGAGAGTGTCACCGCCTCACTGCTGCGTGGCGAAATCCCCGCGCTTCACCTGCTCTCCGGCACGCGCGATCGCAACGCGTACATCCACCGCATCTCCCTAGCCACACACTCCACCAGGACAACGCGCGCCCCTGAGCCGCTGTCTCTTCTCGTCTCTGCTGTTCCCACGTCTGCGCTTACGTTGAGAGCGTCGGCATGCGCTGCCAGCGCTGTTGCACAACGCGGCGTCATTGTCGCTGCGCGGTCGACGCTGGTTGCCGTGTTGAGCGGACACGATGAGGCCGTCACTACGGTCGACTGGAGCTCTTGTGGACACTGGATCGTGACTGGCTCTGAGGATAAGTGTGCTCGTGTTTGGCGTGTCAAGGGTATTTCTAGCGGCACTCATCACATCAAGCATGCTGCTGACACCATGTCCGCCGCCGCGTCAGACTACAACAGTATGTCCGACTCTAACCCGGTCTCCAGTGTCGTCGACAGCCTTACCTCGTCCGCTGCTGCCGTTGCCGCGCTGCGCCCGCTGATAACCGTTCCGTGCATCCACACACTGCGCGGTCACACTCTCGCAATCACTTCCGTCTCATTCTCGCCTTGCGGCCGTCTGCTTGCCACAGCGTCTCGTGACCGCACCGTGCGCCTCTGGTGGGTGCGCCGCGGTCATTGCCGCAAGGGTCTGCGCGAGCATGCGTCATACGTACAGAACGTCACATGGACACCCAGCGGCCGCCAGCTTGTCGCTGTGGCGCGCGACCGCACTCTGCGCGTGTGGAACGCCAACACCATTCTCGGCTACCGTGTTGGCGCAGTTACCGCGCCTCCGCGCGGCTCTGCGCTGCGCGATTACTGCGCGATTCCCGAAGTCATCACCGCCGCTGCTGCCGACGCCGCGGCCGCTAGAGAGGCCGCGCAAGAGTCGGGCGCGCACCCGCAGACGCCCGTCCCGGGCCGCCGTGTGCTCGTGACCGCTGAGTCCGCGCCTGCGGCCGCGCCATGCGCTGCGGTGATCGAGGCCGAGCAGCGCCGCGTGTACCGTGACGCGCTGTCGTTCGCCGCGCACGACTGGAGCGAGAGCGATGCCGATGTGTCTCCTGGCGAGGACTCGTCCGATGAAGAGGAAGTTGAGGATGAGAACGATGTGCAGCTCGGCGGCTTTGCCGGTGCTCGCTCTGAGCCTTTCGCTGAGCTGCTGCGCACACTGGAACCCGGTGACGCGCCACTGCCGCAGGGCGTGTACCCCGCTGGCCGTGTGTTTGGCATGGACTGCAACGACGTCGTGCTGGTGCTGTCCCCGCAGTTCCTCTACGTCGTCGAAGGGTTCAAGCTTGAACCTATCAACGATGGTGCTGACGGACAGCGCATGTACACGCTGTCGACCTCGTACGGTTCCGGTGCTTTGGGCGCGCGTGAGGGCGGCCCGCTGTTCTCCGCTCGCATTGCCCACCGCCGCCGCTTCTGCGACATTGTGTATGACGCGACTTCCGAGTCGTCGAAGGCGCTGACGCAGACTCACTCCGCGCAGTACATGAACACGATCCGTTCGCACTACCTCGCCGACGTCCCGCCTACGCCCGCGCACGTCGAGGCCGTGCTCCACGTCGCCAAACGCGACGCGGCAGTTCGCCCTGGCAGCAACAACAGCGGTGGCGCTCGTGGCTCGGGCAACAACAATGACCGTCGTGGCGGTACAAGCGCGCTGCCGTCTGCAGCGTCCATCCTTGGCGGCACCGTCAATGGCGTCGCCAACTCCCCGATCATGTCGACGCTGCCCGTCGGCACGCTGAGCGAGGCTATTAAGGATTTCTCTCTTGGTCCCAGCGCAGCCACTCAGGCGCGCGCGAGCGCCAACAGCAGCCAGCCTGGGTCGGGTGGCATCGCTGAGATGCGTGCCCGCCTTGCTGCATCGGGCGCCGCTGCAGGTCAGCCTGAGGCGACGGTTGTCGGTGGTGCTGCCTCAGGAACTCACGCCTTTGGCCGCAGCGCTACCGCGCGCGCCGCCGCGTCCTTGATTGACCAGGAGTCGGCGTACTCGACTGTTCTCGGCCGCAACCCTGCGTCTTCGCTTAACGTGTACCGCAGCTCGACTGCGATGAAGACCGGCGACGCCGCTGGCCCCATCCTGACGCAGAATGCCGGTGCCAATGAAGGCTCTCGCGGTGCGCGTGTGTACGCCAAGTGGGCGTGGACTGAGATAGTGGACGTGCTTCGCCGTCGCTACCAGCTGCAGCAGGTTGCACTTGAGGTTTTTTCGAGTGCCGGTGCGACGATCATGCTTGTGTTCGAGTCCCCCGCCGCGCGCAACGAAGCGTTTAACCGCATGGCGTCGATTGCGACGGTACGTCGTGTCGAGAGTACGATGTACGAAGACGCGCATGCCGCGGACGTTGTCGTGTCTAAGCTCACCAACGTCGCGCCGTTGTTTCCTGCCGCCGCGTCGTCGCTGTCCGGTCCGCTGATGAGCGGCGCCTTCGGTGCCACGCTGCAGCTGCCGATGATGATGCGCCCGACGACGCTG
PROTEIN sequence
Length: 978
DATSAAAAHVAAQRLRLRNPGSARGSAVPADAPPTELSPTLSAATMLSSVSGRRNSASATSDASATVESVAWVPEPVFEPVVAIRGMQALTTCLKWAPLPRAYLADIAQEFNLCGTATTANKPAGGAKMPATSTASQSKHDESVTASLLRGEIPALHLLSGTRDRNAYIHRISLATHSTRTTRAPEPLSLLVSAVPTSALTLRASACAASAVAQRGVIVAARSTLVAVLSGHDEAVTTVDWSSCGHWIVTGSEDKCARVWRVKGISSGTHHIKHAADTMSAAASDYNSMSDSNPVSSVVDSLTSSAAAVAALRPLITVPCIHTLRGHTLAITSVSFSPCGRLLATASRDRTVRLWWVRRGHCRKGLREHASYVQNVTWTPSGRQLVAVARDRTLRVWNANTILGYRVGAVTAPPRGSALRDYCAIPEVITAAAADAAAAREAAQESGAHPQTPVPGRRVLVTAESAPAAAPCAAVIEAEQRRVYRDALSFAAHDWSESDADVSPGEDSSDEEEVEDENDVQLGGFAGARSEPFAELLRTLEPGDAPLPQGVYPAGRVFGMDCNDVVLVLSPQFLYVVEGFKLEPINDGADGQRMYTLSTSYGSGALGAREGGPLFSARIAHRRRFCDIVYDATSESSKALTQTHSAQYMNTIRSHYLADVPPTPAHVEAVLHVAKRDAAVRPGSNNSGGARGSGNNNDRRGGTSALPSAASILGGTVNGVANSPIMSTLPVGTLSEAIKDFSLGPSAATQARASANSSQPGSGGIAEMRARLAASGAAAGQPEATVVGGAASGTHAFGRSATARAAASLIDQESAYSTVLGRNPASSLNVYRSSTAMKTGDAAGPILTQNAGANEGSRGARVYAKWAWTEIVDVLRRRYQLQQVALEVFSSAGATIMLVFESPAARNEAFNRMASIATVRRVESTMYEDAHAADVVVSKLTNVAPLFPAAASSLSGPLMSGAFGATLQLPMMMRPTTL