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scnpilot_p_inoc_scaffold_19451_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1038..1721

Top 3 Functional Annotations

Value Algorithm Source
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Variovorax sp. CF313 RepID=J2JY83_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 231.0
  • Bit_score: 212
  • Evalue 3.70e-52
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EJL72850.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 231.0
  • Bit_score: 212
  • Evalue 5.20e-52
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 226.0
  • Bit_score: 209
  • Evalue 1.20e-51

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCTCCGGCCGGTGCCTTTCTTCAGCGCCTTGGTCGTGGAAGCCGACCCCGCGGTCGCGCGCCGCATGCTGCGCATCCTCGGTGCGCTCGCGCCCGGCCGGCACGCGCCGTGTGTGTCCACGCCAGAGGAAGCCCATCATCTGCTGGCGGCCTTCTCGTTCGACCTGGTGTTCGTCGACATGCAGCTTCAACCGACCGGCGAAGGCGCACGGCTGATCACGCGCATACGCGTGGCGCAGCCTCGCAGCCAGGTCGTCGCGATCTCGCACATGGACAACCGGGACCTGGTGCGCTCCGCCTTCGCTGCTGGCGCGACGGGCTATCTGCTCAGCGATGCGGAAGACGCAGAGATTGCCTATGCGCTGCGCGCGCTGGAGAGCGGTGGCGTGGCGCTCGATCCGCGCGTGGGGCGCCGTGTGCTGGACATGCTGGCGGTGTCGATGCGGCGCGGCACTGTTACTGCCCCTCTCGATGCGGCGGAAGCGCCGCGCCAGCTAAGGCCGCGCGAGCTGCAGTTCCTGCGCCTGATCGCCGACGGGCTGAGCAACCGGCAGATCGCCGACGCGCTGGAGGTGTCGATCCACACCGTGGAGTTCCACGCGCGCAACGCCTACCGCAAGCTCGAGGTCAAGTCCCGGACCCAGGCCATCCTCGAGGCGACGCGCCACGGTCTTCTGGGCTGA
PROTEIN sequence
Length: 228
MLRPVPFFSALVVEADPAVARRMLRILGALAPGRHAPCVSTPEEAHHLLAAFSFDLVFVDMQLQPTGEGARLITRIRVAQPRSQVVAISHMDNRDLVRSAFAAGATGYLLSDAEDAEIAYALRALESGGVALDPRVGRRVLDMLAVSMRRGTVTAPLDAAEAPRQLRPRELQFLRLIADGLSNRQIADALEVSIHTVEFHARNAYRKLEVKSRTQAILEATRHGLLG*