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scnpilot_p_inoc_scaffold_19617_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..1991)

Top 3 Functional Annotations

Value Algorithm Source
Antifreeze glycoprotein n=1 Tax=Boreogadus saida RepID=H2KMI4_BORSA similarity UNIREF
DB: UNIREF100
  • Identity: 27.3
  • Coverage: 300.0
  • Bit_score: 67
  • Evalue 7.30e-08
Antifreeze glycoprotein H1C1A4 {ECO:0000313|EMBL:AFQ20102.1}; Flags: Fragment;; TaxID=44932 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Tele similarity UNIPROT
DB: UniProtKB
  • Identity: 26.1
  • Coverage: 291.0
  • Bit_score: 61
  • Evalue 4.30e-06

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Taxonomy

Boreogadus saida → Boreogadus → Gadiformes → Neopterygii → Chordata → Metazoa

Sequences

DNA sequence
Length: 1989
GTGAGTTCGCTTTCTGTATTGCCTTCTATCAAAATTTCACCCAACTCTGGCCAATCTTCGTTGTCTTCGTTTTGCTATTCTCTCTTAGGTCGCCAGTTCTCAAGCGCGCCGAAGCTATTGACACACGCCGCTGCCTCCGCTGGCCTCTCATTTGTGCGCGCCGCGATCTTGGACCGCGTCCCCGGCTTTGACATCAAGCTCTTCGAAGCGCTGTCCGCCGCCGCGCTGTGCGGTGAGGTGCCCGCGCTGTTTCTCCACGGTCTGGGCGATGATTTTGTGCCGCCCGCGCAGTCGATTGCGCTGTTTGACGCTTACGGCTCCGAGCCGGCCCCGCGCGGCCATCCTGCGCCGGCCATCGGGCCCTCGTGGTCGCAAACTGACCCTGGCACCGAGAGCACCTCGACTGCAGAGCTAGAGTTACAGACTGGGGCTGGGGCAGGAGATTCGGCACAGCAGCGCAGGCTGGAGCGGCAGCAGCGGCGGCGGCGCGAGCGCGCGCGCGTGTTCGACGACGACAACGAAGACGACGACAATGGTGATGATCTTGATCGCACTGGCCGTGTTGTAAGTGGAAGCAACGGCAGGCGGCTTGGGCTGCAAACTAAGACTACCGCGACGGGTGCTGGGGACGGCTCTGACGCCGACGCTGATGCACATGCGGAGGCCGCCGACGTTGCTGCCCCGCTGCCGTTTCCTTCAACCGCGTCAGCAGCATCGATGCAACAGCAGCAGAATCCGTCTCCGTCCCCCTCACAGTCGCAGTCTCCGTTGCCGGGCGGCGAGCCCCCGTCGCCGTCGCTGTTGCAGCCGCCGTCACCGCTGCAGTGGGGCGCGCCCCTCCGCGCCACGCCTCTGCTCACCGCAACCACCGCCGCCACGGACAACAACAGCAGCAACAGCAGCGGCGACGAGGGCGAGCGCCGAAAGAGCACGGACATCGAGTCCGCACTGGCTTCTCTGTTCACGTCGACAGGCGGTGGCGTTGATGTCGCCGCTTTCCTCCGTGCCCGCCCCGGCGCGCGCGTGGAGGCCCGCGACGCCGGCTTTGTTATCCTCTCCGCCGCCGCCACGGCACTGGGCGCGCCTAAGTACCACGTGTTGATGGAGGGCGCGCACAACGACCTGCGCCCGCCCGCCGCACTCGACACTGTCGCGGACTTCATCTTTGACCACGTGATCTCGCCCGCCGCGCGCGCACGGCTTGAGGCGCCGCTTGCACTCGTGCCCGCCGCCGTCGCCGCCACGGCCGCGCTGGGCTGCGCGACTCTGCCGCCTTGGTTCACCGGCGGGGCCGAGGCGATCGCGCGAATCGCGCCGTCGCCCGCCGCGGCTGCGCGCCTCGCCACCGCAGCCGCAGCGGCCACGGTAGTAGCGGCGTCGTTGTCGCCCACTGCGGTGTTGTCGCCTACAGCAGCGGGCGCGTCGTGTTCCATCGACGCAGCGCCCGCTGGCGCCCCGGCGCTGAGCGCGCTGGCCGTGCTGCGGTGCGACCGGCCGAAGGTGTTTGTGTGCCGGCGCGTGCGCCGCGCGGCTGAGCACGAGGATGAGCTCAAGCTGCGGCTCGAGGCTGAGCGGTTAGGAGTCGACCCTGGAGATGTCAGGCTGCCGCGGTTTAAGCAGCCGAAGCGCGGCATGGGCGGGGCCATTGGGGCACGCTTTGCGGGGATGGTGGGCGCTGCGGAGGCCGGCGCTGGCGGCGTGGCGGCCAGGCAAGGACGCGATAATGCACCTAATCACGAGAACAACAACGAAGACGATGATGATGATGACGACGACGATGACGACGATGAGCACAATGGTGAGTTCGCTAAGGTCAAAGCGAAGACGAGCACAAGCGCTGCGGCAGCGTTCCAAGAGGCCAAGGACGGCAGCGTTGCTGCCCAGAACAACGATGTCGACGAAGACGACGACGATGAGGCTGACTCTGCTATCAAAGCTCACCTGCCCTCGTCAAGCTCTCGCTCTCGCTCCCGTGCGAGCGATGCCGCC
PROTEIN sequence
Length: 663
VSSLSVLPSIKISPNSGQSSLSSFCYSLLGRQFSSAPKLLTHAAASAGLSFVRAAILDRVPGFDIKLFEALSAAALCGEVPALFLHGLGDDFVPPAQSIALFDAYGSEPAPRGHPAPAIGPSWSQTDPGTESTSTAELELQTGAGAGDSAQQRRLERQQRRRRERARVFDDDNEDDDNGDDLDRTGRVVSGSNGRRLGLQTKTTATGAGDGSDADADAHAEAADVAAPLPFPSTASAASMQQQQNPSPSPSQSQSPLPGGEPPSPSLLQPPSPLQWGAPLRATPLLTATTAATDNNSSNSSGDEGERRKSTDIESALASLFTSTGGGVDVAAFLRARPGARVEARDAGFVILSAAATALGAPKYHVLMEGAHNDLRPPAALDTVADFIFDHVISPAARARLEAPLALVPAAVAATAALGCATLPPWFTGGAEAIARIAPSPAAAARLATAAAAATVVAASLSPTAVLSPTAAGASCSIDAAPAGAPALSALAVLRCDRPKVFVCRRVRRAAEHEDELKLRLEAERLGVDPGDVRLPRFKQPKRGMGGAIGARFAGMVGAAEAGAGGVAARQGRDNAPNHENNNEDDDDDDDDDDDDEHNGEFAKVKAKTSTSAAAAFQEAKDGSVAAQNNDVDEDDDDEADSAIKAHLPSSSSRSRSRASDAA