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scnpilot_p_inoc_scaffold_18317_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(977..1381)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=2 Tax=Paenibacillus RepID=D3EKV1_GEOS4 similarity UNIREF
DB: UNIREF100
  • Identity: 28.0
  • Coverage: 125.0
  • Bit_score: 63
  • Evalue 2.20e-07
Isoprenylcysteine carboxyl methyltransferase Tax=RBG_13_Chloroflexi_68_17_curated UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 124.0
  • Bit_score: 78
  • Evalue 9.00e-12
LuxR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 28.0
  • Coverage: 125.0
  • Bit_score: 63
  • Evalue 6.00e-08

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Taxonomy

RBG_13_Chloroflexi_68_17_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 405
ATGAATAAAGAGTACCTCGATCAAATGCAAAGTGTGGCTGTTCTGGTCTGTGATGATGAGGTGAGAACCCGTCAGGCACTTAAAGCCCTGTTACTTACGCGAGAGCTTGTCCGAATGGATAAATTTATCCCGTCCATTCAAGTGATTGATGAAGCATGCCAGGTAATTGATCTCTCCAAGATGGTGGAAATTTATCAACCACAAGTATTAATCATGGATGCCCCCAAGGCCGGAAATGCGAGTCTACAAGTAATCCGTGAGATCAAGTGGAAATGGCCTTACTTAAAAATTGTGATGCTCTCAATGAACCCTGATTTGGGCCCAACGGCGGTAAAAGCCGGAGTAGACAAATTTCTGCTCAAAGGGTGCTCAGCTGAAACTCTATTTGAGGCTATTTTAGACTAA
PROTEIN sequence
Length: 135
MNKEYLDQMQSVAVLVCDDEVRTRQALKALLLTRELVRMDKFIPSIQVIDEACQVIDLSKMVEIYQPQVLIMDAPKAGNASLQVIREIKWKWPYLKIVMLSMNPDLGPTAVKAGVDKFLLKGCSAETLFEAILD*