ggKbase home page

scnpilot_p_inoc_scaffold_20952_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..206)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXY9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 68.0
  • Bit_score: 132
  • Evalue 1.50e-28
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EHL22949.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 68.0
  • Bit_score: 132
  • Evalue 2.00e-28
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 68.0
  • Bit_score: 94
  • Evalue 9.50e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. NO-1 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGAGCTCTACCGCCCTTGGAGCACGCTCTGGAATGACAGGTCAAGGTGTTCGAAAGTTGGAGAAAGCTGAGGCGGATGGTGCGATAACGCTCAACACCCTCAGGCGTCTTGCTGAAGGGCTGGACTGCGAGGTACGCTATGTATTTGTTCCTAGAACGAGCCTCGTAGAACAGGTCCTCCGTCGTACCCATGAGGTCACGGGC
PROTEIN sequence
Length: 68
MSSTALGARSGMTGQGVRKLEKAEADGAITLNTLRRLAEGLDCEVRYVFVPRTSLVEQVLRRTHEVTG