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scnpilot_p_inoc_scaffold_21112_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(940..1533)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=2 Tax=Corynebacterium equii RepID=E9T4J7_COREQ similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 198.0
  • Bit_score: 210
  • Evalue 1.60e-51
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EGD22869.1}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 3370 similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 198.0
  • Bit_score: 210
  • Evalue 2.20e-51
Transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 187.0
  • Bit_score: 173
  • Evalue 4.70e-41

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Taxonomy

Rhodococcus equi → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGATGAGTGCCGCACCCCCGCCGTCCCTGCGCGAGAAGACGCGCGCAGCTGTGCGCGCGCAGATCGCCGAGGCGGCCCTCGATCTTTTCGCTGAGCACGGCTTCGACGAGGTGACCGTCGAGCAGATCGCGGCGGCCGCCGGGATCTCAACACGCAGCTTCAACCGCTACTTTCCGGCCAAGGAAGACGCGATCCTCGGCGACACCGAACCGTGGGGCGTCCTCGTCCGCGACACCCTCGAGAACCGGCCGGTCAACGAGCCTGTCTGGGAGTCTCTGCGGCACGCGTTCAGCGCGCTCCTGGCCATGTCCGACATGAGCGGGGAGCGGCAGAAGCGTGGGATGCGCGTTCTCAACAGCGCCCCCTCGCTTCGTGCACGCAACCTCGAGAAGCACCTCGGCTGGGCGAGCACGCTCACGCCGATCGTGGCGCGTCGCATTGGTGGCGCGGATGCCGACCTGCGCGCATACGCTGTCGTGCAGTGCGCAATCGCTTGCTTCGAGGCAGCCCTTAACGCCTGGGCGATAGCCGGAGAGACTCGGTCGCCAGACGAACTCCTTGCCCTCTCGTTCGGTGCGCTCTCCGGCACCTAA
PROTEIN sequence
Length: 198
MMSAAPPPSLREKTRAAVRAQIAEAALDLFAEHGFDEVTVEQIAAAAGISTRSFNRYFPAKEDAILGDTEPWGVLVRDTLENRPVNEPVWESLRHAFSALLAMSDMSGERQKRGMRVLNSAPSLRARNLEKHLGWASTLTPIVARRIGGADADLRAYAVVQCAIACFEAALNAWAIAGETRSPDELLALSFGALSGT*