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scnpilot_p_inoc_scaffold_20048_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 490..1110

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Variovorax paradoxus RepID=UPI00036EB6BD similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 206.0
  • Bit_score: 404
  • Evalue 7.90e-110
  • rbh
50S ribosomal protein L4/l1e similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 206.0
  • Bit_score: 400
  • Evalue 2.50e-109
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parad similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 206.0
  • Bit_score: 400
  • Evalue 1.20e-108

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGCAACTCGAACTCCTGAACGAACAAGGCCAGGCCGCGTCGAAGTACGACGCTCCCGAGACCGTGTTCGGCCGTGACTACAACGAAGACCTGGTCCACCAGATCGTCGTTGCATTCCAGGCCAACGCCCGTCAAGGCACGCGCGCCCAGAAGGACCGCGAACAGGTCAAGCACTCGACCAAGAAGCCTTTCAAGCAAAAGGGAACGGGCCGCGCCCGTGCCGGTATGACGTCCTCGCCGCTGTGGCGCGGGGGTGGTCGTATCTTCCCGAACATGCCCGACGAAAACTTCTCGCAGAAGATCAACAAGAAGATGTACCGCGCCGGCATGGCCTCCATCTTCTCGCAACTCGCTCGCGAAGGCCGTCTGGCCGTGGTCGATTCGATCAAGGTCGACTCGCCCAAGACCAAGCCGCTGGCTGCCCGTTTCAAGGCGATGAATCTCGAGTCCGTGCTCGTGATCGCCGAAGAAGTCGACGAAAACCTGTACCTTGCCTCGCGCAATCTGGTGAACGTTCTCGTGGTCGAACCCCGTTACGCCGATCCGGTGTCGCTGGTTCACTACAAGAAGGTGCTGGTCACCAAGGGTGCCGTCGACAAGCTCAAGGAGATGTTCGCATGA
PROTEIN sequence
Length: 207
MQLELLNEQGQAASKYDAPETVFGRDYNEDLVHQIVVAFQANARQGTRAQKDREQVKHSTKKPFKQKGTGRARAGMTSSPLWRGGGRIFPNMPDENFSQKINKKMYRAGMASIFSQLAREGRLAVVDSIKVDSPKTKPLAARFKAMNLESVLVIAEEVDENLYLASRNLVNVLVVEPRYADPVSLVHYKKVLVTKGAVDKLKEMFA*