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scnpilot_p_inoc_scaffold_20115_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 719..2758

Top 3 Functional Annotations

Value Algorithm Source
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Schlesneria paludicola RepID=UPI00029A8000 similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 499.0
  • Bit_score: 425
  • Evalue 1.40e-115
PAS domain S-box protein {ECO:0000313|EMBL:EKU83671.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 573.0
  • Bit_score: 411
  • Evalue 1.70e-111
sensory box protein similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 454.0
  • Bit_score: 368
  • Evalue 5.80e-99

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Taxonomy

Massilia timonae → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2040
ATGAACGACGCACTCGACGACCCGATCAACGACCCCGCGCGGCTTGAAGACCTGGCCGATCTCGAGATGCTGAACACCCCGGCCGACGCCGATTTCGACCGGCTGACGCGGCTGGCGTCGCGGCTGCTCGGCGTCCCGGTGGCGTTGGTGTCGCTGGTCAGCCACGACCGCCAGTTCTTCAAGAGCTGCGTGGGGCTGCCCGAGCCCTGGGCCTCGCTCCGCGAGACGCCGCTGAGCCACTCGTTCTGCCAGCACGTCGTCCGCGGTCGCGAGCCGCTGGTGGTCGACGACGCGCGGCGGCACCCGCTGGTCCGCGACAACCTCGCGATCGGCGACCTGGGCGTCGCCGCGTATCTCGGCGTCCCGCTGGTCTCGGACGCGGGCCGCGTGCTGGGCTCGTTCTGCGCCATCGACGTCGAGCCCAGGCGCTGGACCGCGGCCGACGTCGAGACGCTCAGCGACCTGGCCGCGTCGGTGACGACCGAGCTGCGCCTCAAGCGCGAGCAGAGCCAGTTGCGCGGCCTGCACGCGGCGATCGCGGCCCATCGCGACCGCCTCCAGGTGATGCTCTCCAGCATCGGCGACGCCGTCATCGCCACCGACGCCGAAGGCGTGGTGAGCTTCCTGAACCCGGTCGCCGAGCGGCTCACCGGCTGGCCGTCCGTCGAGGCCGTCGGGCGGCCCGTCGAGGAGGTGTTCCGCATCGTCGACGAGACGACCCGCCGGCCGGCCGTGCAGCCGGTCAGGAGGGTCATCGAGGGGGGCGTCGCCGAGGGCCTCGCCGCCCACACGATCCTCATCGGGCGCGACGGCGTCGAGCGGCCGATCAGCGACAATGCGTCGCCCATCAAGTCGCCCTCCGGCGCGGCCGCCGGCGTCATCCTCGTCTTCCGCGACGTCGCCGAGCGGATCGCGACGGACCGGTCGCTCCGCGAGAGCGAGGTCCGGTATCGGACCCTCTTCGACTCGATCGACGAAGGCTTCTGCATCATCGAGATGATCTACGACGCGCGGGGCGAGGCCGTCGACTACCGCTTCGTCGAGACGAACCCGGCCTTCCAGAGGCACACCGGCCTCTCCGACGCCGAGGGCCGGACGATGCGGGAGATCGCCCCCGACCACGAGGACCACTGGTTCGAGATGTACGGCGAGGTCGTCAGGACCGGCGCCCCGATCCGGTTCGTGAACGAGGCGCGGGCGCTGGGCGATCGCTGGTTCGACGTCTACGCGTTCCGCGTCGGCGAGCCCGAACAGCGCCGGGTCGCCGTGCTGTTCAACGACGTCACCGGGAGGATCGAGTCGGAGCGCGAGCGCGAGGAGATGCTCGAGCGGCTCAAGAACGCCGACCGGATGAAGGACCAGTTCCTGGCCATGCTGGCCCACGAACTGAGGAACCCCCTGTCGGCGATCGGCGTCGCCGCCCGGATCGCGCACAAGGTCAACGGGGACGAAGCCGTGTCGTCGCACCTGGGGATCATCCAGCGCCAGACGCGTCACCTCGCGCGGCTGGTCGACGACCTGCTCGACGTCTCCCGGATCAGCCAGGGGAAGATCCGGCTGAGGCTGGAGGCGACCGAGCTGCGGAGCGTGGTCGATCGCGCCGTCGAGCTGGCGCGCCCCGCCGTGGACGCGAAGCGTCACCGCCTGTCCGTGAACCTGCCCGACGAAGCGATCGCGTTCCAGGCCGACTCCGTGCGGGTCGAGCAGGTGCTGGGCAACCTGCTCACCAACGCCGCGAAATACACGGAGCCCGGCGGCTCGATCGTCCTGGACGCCCGTCGCGAGGACGACGCGATCGTGATGCGCGTCGCGGACGACGGCGTGGGGATCAGCCGGCCCATGCAGCTCCGGATCTTCGACCTGTTCGCGCAGGACGACGAGTCGCTGGCGCACTCGCAAGGGGGGCTGGGCATCGGCCTCACGCTCGTCAAGAACCTCGTCGAGCTGCACGGCGGCACGATCGCCGTCGCGAGCGCCGGCCCCGGCGAGGGCTCGGAGTTCACCGTCCGGCTCCCCCTGCTCGGAGCCGAAGGCGGGTGA
PROTEIN sequence
Length: 680
MNDALDDPINDPARLEDLADLEMLNTPADADFDRLTRLASRLLGVPVALVSLVSHDRQFFKSCVGLPEPWASLRETPLSHSFCQHVVRGREPLVVDDARRHPLVRDNLAIGDLGVAAYLGVPLVSDAGRVLGSFCAIDVEPRRWTAADVETLSDLAASVTTELRLKREQSQLRGLHAAIAAHRDRLQVMLSSIGDAVIATDAEGVVSFLNPVAERLTGWPSVEAVGRPVEEVFRIVDETTRRPAVQPVRRVIEGGVAEGLAAHTILIGRDGVERPISDNASPIKSPSGAAAGVILVFRDVAERIATDRSLRESEVRYRTLFDSIDEGFCIIEMIYDARGEAVDYRFVETNPAFQRHTGLSDAEGRTMREIAPDHEDHWFEMYGEVVRTGAPIRFVNEARALGDRWFDVYAFRVGEPEQRRVAVLFNDVTGRIESEREREEMLERLKNADRMKDQFLAMLAHELRNPLSAIGVAARIAHKVNGDEAVSSHLGIIQRQTRHLARLVDDLLDVSRISQGKIRLRLEATELRSVVDRAVELARPAVDAKRHRLSVNLPDEAIAFQADSVRVEQVLGNLLTNAAKYTEPGGSIVLDARREDDAIVMRVADDGVGISRPMQLRIFDLFAQDDESLAHSQGGLGIGLTLVKNLVELHGGTIAVASAGPGEGSEFTVRLPLLGAEGG*