ggKbase home page

scnpilot_p_inoc_scaffold_20254_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 335..1132

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003697050 similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 263.0
  • Bit_score: 462
  • Evalue 4.10e-127
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL67430.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 262.0
  • Bit_score: 444
  • Evalue 1.20e-121
putative surfeit locus 1 protein similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 278.0
  • Bit_score: 408
  • Evalue 1.20e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGGCGCCGGCAGTCCGCCAGCGTTCCACCGCCGCACGGGTGGCGCTGGCGGTCTTCGCCGCCCTCGCCTTCTGCGGCTTCCTCGCGCTCGGCACCTGGCAGGTCGAGCGCAGGGCCTGGAAACTGGATCTCATCGCCCGCGTCGACCAACGCGTGCACGCCCCGGCCGGTACGGCCCCCGGGCGAAACGAATGGCCCACCGTCAACGCGGCCAACGACGAATACCGGCACATCCGCATCGCCGGCACTTTCCTCCACGACAAAGAAACGCTGGTGCAAGCCAGCACCCGGCTCGGCGCCGGCTTCTGGGTGCTGACCCCGCTGAAGGCAGCCGACGGCACCGTGGTGCTGGTCAACCGGGGCTTCGTGCCTCCCGAGGCGCGTGAGCGCTCTGCCCGCACCGCGTCCGAGCCCCAGGGCGAGACCACCGTGGCCGGCTTGCTGCGCCTGACCGAGCCCAAGGGCGGCTTCCTGCGCAAGAACGACCCGGCGGCCGACCGCTGGTTCTCGCGCGACGTGCAGGCCATCGCCACCGCGCGCGGCCTGGCTGACGTGGCACCCTATTTCGTCGACGCCGAGGCCACGCCCGCCGCAGCCACCGCACAGCCCACCGACACCCCCGCGTGGCCCGCCGCCGGCCTGACCGTCATCGCCTTCCCCAACAGCCACCTCGTCTACGCATTGACCTGGTATGGCCTGGCGCTGATGGTGCTGATCGCCGCCTGGTTCGTGCGGCGCAGCGAAAATGCGGGCGATGCCGACGCCCGCCCCGCCCCACAAGATGCCCGCCGCGACTGA
PROTEIN sequence
Length: 266
MAPAVRQRSTAARVALAVFAALAFCGFLALGTWQVERRAWKLDLIARVDQRVHAPAGTAPGRNEWPTVNAANDEYRHIRIAGTFLHDKETLVQASTRLGAGFWVLTPLKAADGTVVLVNRGFVPPEARERSARTASEPQGETTVAGLLRLTEPKGGFLRKNDPAADRWFSRDVQAIATARGLADVAPYFVDAEATPAAATAQPTDTPAWPAAGLTVIAFPNSHLVYALTWYGLALMVLIAAWFVRRSENAGDADARPAPQDARRD*