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scnpilot_p_inoc_scaffold_20254_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2525..2794

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Variovorax paradoxus RepID=UPI00036100B7 similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 89.0
  • Bit_score: 152
  • Evalue 2.30e-34
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain {ECO:0000313|EMBL:EJL67428.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 90.0
  • Bit_score: 150
  • Evalue 9.60e-34
two component transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 93.0
  • Bit_score: 149
  • Evalue 5.60e-34

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGACCGGAACCGAAGCTGAGCGCCAGTTGCTGATCGTCGAGGACGACGATGCCTTCGCGCGCACGCTGGGCCGTTCGTTCGAGCGACGCGGCTATGCCGTGACGCATGCGAGCAACCTCGAGGAAGCCGGGGCCTTGCTGGAAACCATGTCGCCCGGCTATGCCGTGGTCGACCTCAAGCTCAACGGCGAGGCCTCGGGCCTGGCCTGCGTGCAGATGCTGCACCGTCACAACGCCAAGATGCTGATCGTGGTGCTGACGGGCTTTGCC
PROTEIN sequence
Length: 90
MTGTEAERQLLIVEDDDAFARTLGRSFERRGYAVTHASNLEEAGALLETMSPGYAVVDLKLNGEASGLACVQMLHRHNAKMLIVVLTGFA