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scnpilot_p_inoc_scaffold_18491_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1665..2315

Top 3 Functional Annotations

Value Algorithm Source
thioredoxin n=1 Tax=Variovorax paradoxus RepID=UPI0003777EBB similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 189.0
  • Bit_score: 347
  • Evalue 1.20e-92
  • rbh
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:EJL75583.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vario similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 184.0
  • Bit_score: 340
  • Evalue 2.10e-90
redoxin domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 188.0
  • Bit_score: 326
  • Evalue 4.70e-87

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGCACCCCGACGAGGGCGAACGCGCCGAAGAATGGGCCTCGCTCATCGAGCACCCATCACTCTTTCAAGAAGGAATCACCATCATGCGACTGCGCTCTCCCGCCACCTTCTTCGCTGTAGCCATCGCGGCATCAGCGGCAGCCCTGACGCTGACTTTCGCGGCACCGCCGCTGGGCGGCGACATTCCCGCCGCGCAGGCCCAGCCTGCCCCCGACTTCCAGAACATCGACACCTGGCTCAACTCCCAGCCGCTCAAGCTCGAGGAGTTGCGCGGCAAGGTCGTGCTGGTCGACTTCTGGACCTACACCTGCATCAACTGCCTCAACCACCTGCCCTACGTGAAAGACTGGAACGCGAAGTACAAGGACAAGGGCCTCGTCGTGGTGGGCGTGCACACGCCCGAGTTCGCCTACGAAAAGTCGACCAAGAACGTGAAGGACGCGATCCAGCGCCTGCAGATCACCCATGCCGTGGCGCAGGACAACAGCTACGGCACCTGGAAGGCCTTCAAGAACCAGTACTGGCCCGCCGTGTACCTGATCGACAAGCAGGGAAAGATCGTCTACTCGCACTTCGGCGAGGGCAGCTATGGCGCCACGGAGAAGAAGATCCAGGCGTTGCTGGCCGAGCCTTTGCCTGTGGGGTCTTGA
PROTEIN sequence
Length: 217
MHPDEGERAEEWASLIEHPSLFQEGITIMRLRSPATFFAVAIAASAAALTLTFAAPPLGGDIPAAQAQPAPDFQNIDTWLNSQPLKLEELRGKVVLVDFWTYTCINCLNHLPYVKDWNAKYKDKGLVVVGVHTPEFAYEKSTKNVKDAIQRLQITHAVAQDNSYGTWKAFKNQYWPAVYLIDKQGKIVYSHFGEGSYGATEKKIQALLAEPLPVGS*